Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRA2BP62995 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
TRA2BP62995 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRA2BP62995 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRA2BP62995 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRA2BP62995 SIGLEC30P-201ENST00000455569 941 ntBASIC16.45■□□□□ 0.22
TRA2BP62995 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRA2BP62995 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
TRA2BP62995 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.45■□□□□ 0.22
TRA2BP62995 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.45■□□□□ 0.22
TRA2BP62995 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.45■□□□□ 0.22
TRA2BP62995 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.45■□□□□ 0.22
TRA2BP62995 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRA2BP62995 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TRA2BP62995 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRA2BP62995 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.45■□□□□ 0.22
TRA2BP62995 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TRA2BP62995 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.45■□□□□ 0.22
TRA2BP62995 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
TRA2BP62995 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.45■□□□□ 0.22
TRA2BP62995 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.45■□□□□ 0.22
TRA2BP62995 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRA2BP62995 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRA2BP62995 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRA2BP62995 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRA2BP62995 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRA2BP62995 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRA2BP62995 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRA2BP62995 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRA2BP62995 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TRA2BP62995 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRA2BP62995 SIGLEC16-201ENST00000599858 1437 ntBASIC16.45■□□□□ 0.22
TRA2BP62995 LTB4R2-202ENST00000528054 3092 ntBASIC16.44■□□□□ 0.22
TRA2BP62995 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRA2BP62995 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRA2BP62995 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.44■□□□□ 0.22
TRA2BP62995 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TRA2BP62995 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRA2BP62995 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRA2BP62995 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
TRA2BP62995 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRA2BP62995 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
TRA2BP62995 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRA2BP62995 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.44■□□□□ 0.22
TRA2BP62995 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRA2BP62995 SPDYE21P-201ENST00000413323 827 ntBASIC16.44■□□□□ 0.22
TRA2BP62995 NUS1P2-201ENST00000417358 873 ntBASIC16.44■□□□□ 0.22
TRA2BP62995 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRA2BP62995 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.44■□□□□ 0.22
TRA2BP62995 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRA2BP62995 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TRA2BP62995 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.44■□□□□ 0.22
TRA2BP62995 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.44■□□□□ 0.22
TRA2BP62995 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.44■□□□□ 0.22
TRA2BP62995 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.44■□□□□ 0.22
TRA2BP62995 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRA2BP62995 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRA2BP62995 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRA2BP62995 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRA2BP62995 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRA2BP62995 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
TRA2BP62995 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRA2BP62995 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRA2BP62995 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.44■□□□□ 0.22
TRA2BP62995 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.44■□□□□ 0.22
TRA2BP62995 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.44■□□□□ 0.22
TRA2BP62995 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TRA2BP62995 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRA2BP62995 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRA2BP62995 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRA2BP62995 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRA2BP62995 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRA2BP62995 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.43■□□□□ 0.22
TRA2BP62995 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRA2BP62995 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.43■□□□□ 0.22
TRA2BP62995 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRA2BP62995 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TRA2BP62995 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRA2BP62995 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRA2BP62995 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRA2BP62995 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
TRA2BP62995 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRA2BP62995 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRA2BP62995 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRA2BP62995 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRA2BP62995 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRA2BP62995 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.43■□□□□ 0.22
TRA2BP62995 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.43■□□□□ 0.22
TRA2BP62995 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.43■□□□□ 0.22
TRA2BP62995 AC124947.2-201ENST00000547118 1133 ntBASIC16.43■□□□□ 0.22
TRA2BP62995 AC073592.4-201ENST00000623827 446 ntBASIC16.43■□□□□ 0.22
TRA2BP62995 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.43■□□□□ 0.22
TRA2BP62995 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.43■□□□□ 0.22
TRA2BP62995 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.43■□□□□ 0.22
TRA2BP62995 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.43■□□□□ 0.22
TRA2BP62995 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRA2BP62995 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRA2BP62995 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRA2BP62995 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRA2BP62995 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms