Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
VBP1P61758 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.67■□□□□ 0.1
VBP1P61758 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
VBP1P61758 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
VBP1P61758 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VBP1P61758 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC15.67■□□□□ 0.1
VBP1P61758 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VBP1P61758 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.67■□□□□ 0.1
VBP1P61758 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC15.67■□□□□ 0.1
VBP1P61758 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VBP1P61758 AC097658.1-201ENST00000475555 843 ntBASIC15.67■□□□□ 0.1
VBP1P61758 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC15.67■□□□□ 0.1
VBP1P61758 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC15.67■□□□□ 0.1
VBP1P61758 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VBP1P61758 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC15.67■□□□□ 0.1
VBP1P61758 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.67■□□□□ 0.1
VBP1P61758 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC15.67■□□□□ 0.1
VBP1P61758 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC15.67■□□□□ 0.1
VBP1P61758 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VBP1P61758 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
VBP1P61758 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VBP1P61758 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
VBP1P61758 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.67■□□□□ 0.1
VBP1P61758 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.67■□□□□ 0.1
VBP1P61758 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VBP1P61758 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
VBP1P61758 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
VBP1P61758 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
VBP1P61758 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
VBP1P61758 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VBP1P61758 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VBP1P61758 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
VBP1P61758 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VBP1P61758 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
VBP1P61758 FLJ16779-201ENST00000612722 7638 ntBASIC15.66■□□□□ 0.1
VBP1P61758 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.66■□□□□ 0.1
VBP1P61758 AC092384.3-202ENST00000564646 2873 ntBASIC15.66■□□□□ 0.1
VBP1P61758 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
VBP1P61758 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
VBP1P61758 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
VBP1P61758 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VBP1P61758 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VBP1P61758 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC15.66■□□□□ 0.1
VBP1P61758 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VBP1P61758 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC15.66■□□□□ 0.1
VBP1P61758 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VBP1P61758 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
VBP1P61758 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.66■□□□□ 0.1
VBP1P61758 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
VBP1P61758 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
VBP1P61758 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.66■□□□□ 0.1
VBP1P61758 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VBP1P61758 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC15.66■□□□□ 0.1
VBP1P61758 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC15.66■□□□□ 0.1
VBP1P61758 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC15.66■□□□□ 0.1
VBP1P61758 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC15.66■□□□□ 0.1
VBP1P61758 RARRES2P10-201ENST00000564312 460 ntBASIC15.66■□□□□ 0.1
VBP1P61758 MYC-209ENST00000641252 345 ntBASIC15.66■□□□□ 0.1
VBP1P61758 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VBP1P61758 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.66■□□□□ 0.1
VBP1P61758 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.66■□□□□ 0.1
VBP1P61758 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VBP1P61758 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.66■□□□□ 0.1
VBP1P61758 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VBP1P61758 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
VBP1P61758 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
VBP1P61758 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC15.66■□□□□ 0.1
VBP1P61758 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VBP1P61758 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
VBP1P61758 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VBP1P61758 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VBP1P61758 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
VBP1P61758 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VBP1P61758 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
VBP1P61758 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
VBP1P61758 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VBP1P61758 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
VBP1P61758 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC15.66■□□□□ 0.1
VBP1P61758 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
VBP1P61758 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VBP1P61758 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
VBP1P61758 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VBP1P61758 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC15.65■□□□□ 0.1
VBP1P61758 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.65■□□□□ 0.1
VBP1P61758 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC15.65■□□□□ 0.1
VBP1P61758 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.65■□□□□ 0.1
VBP1P61758 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VBP1P61758 LINC02228-204ENST00000642115 2962 ntBASIC15.65■□□□□ 0.1
VBP1P61758 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VBP1P61758 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VBP1P61758 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VBP1P61758 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
VBP1P61758 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
VBP1P61758 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VBP1P61758 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VBP1P61758 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
VBP1P61758 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.65■□□□□ 0.1
VBP1P61758 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
VBP1P61758 BUB3-202ENST00000368859 667 ntTSL 3 BASIC15.65■□□□□ 0.1
VBP1P61758 METTL15-202ENST00000403099 795 ntTSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms