Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDC42P60953 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDC42P60953 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CDC42P60953 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDC42P60953 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.98■□□□□ 0.15
CDC42P60953 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CDC42P60953 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CDC42P60953 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDC42P60953 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDC42P60953 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CDC42P60953 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDC42P60953 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDC42P60953 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDC42P60953 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDC42P60953 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.97■□□□□ 0.15
CDC42P60953 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.97■□□□□ 0.15
CDC42P60953 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.97■□□□□ 0.15
CDC42P60953 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDC42P60953 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDC42P60953 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC15.97■□□□□ 0.15
CDC42P60953 AC008894.3-201ENST00000624324 3103 ntBASIC15.97■□□□□ 0.15
CDC42P60953 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
CDC42P60953 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDC42P60953 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDC42P60953 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDC42P60953 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CDC42P60953 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CDC42P60953 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDC42P60953 AC046185.3-201ENST00000623228 1824 ntBASIC15.97■□□□□ 0.15
CDC42P60953 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDC42P60953 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CDC42P60953 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CDC42P60953 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDC42P60953 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CDC42P60953 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC15.97■□□□□ 0.15
CDC42P60953 AC010653.2-201ENST00000623505 997 ntBASIC15.97■□□□□ 0.15
CDC42P60953 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC15.97■□□□□ 0.15
CDC42P60953 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDC42P60953 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDC42P60953 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDC42P60953 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
CDC42P60953 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDC42P60953 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDC42P60953 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.97■□□□□ 0.15
CDC42P60953 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.97■□□□□ 0.15
CDC42P60953 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDC42P60953 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDC42P60953 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDC42P60953 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDC42P60953 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDC42P60953 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDC42P60953 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDC42P60953 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDC42P60953 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CDC42P60953 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.96■□□□□ 0.15
CDC42P60953 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CDC42P60953 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
CDC42P60953 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CDC42P60953 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CDC42P60953 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.96■□□□□ 0.15
CDC42P60953 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDC42P60953 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CDC42P60953 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDC42P60953 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDC42P60953 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC15.96■□□□□ 0.15
CDC42P60953 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
CDC42P60953 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDC42P60953 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDC42P60953 UNC93B2-201ENST00000285383 730 ntBASIC15.96■□□□□ 0.15
CDC42P60953 PRR31-201ENST00000371629 978 ntTSL 2 BASIC15.96■□□□□ 0.15
CDC42P60953 RPS2P55-201ENST00000397318 883 ntBASIC15.96■□□□□ 0.15
CDC42P60953 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC15.96■□□□□ 0.15
CDC42P60953 AC107956.1-201ENST00000494359 873 ntBASIC15.96■□□□□ 0.15
CDC42P60953 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDC42P60953 PENK-204ENST00000518770 863 ntTSL 2 BASIC15.96■□□□□ 0.15
CDC42P60953 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.96■□□□□ 0.15
CDC42P60953 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDC42P60953 AL139327.4-201ENST00000612362 153 ntBASIC15.96■□□□□ 0.15
CDC42P60953 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.96■□□□□ 0.15
CDC42P60953 AC113410.3-201ENST00000623366 203 ntBASIC15.96■□□□□ 0.15
CDC42P60953 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.96■□□□□ 0.15
CDC42P60953 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
CDC42P60953 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.96■□□□□ 0.15
CDC42P60953 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.96■□□□□ 0.15
CDC42P60953 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDC42P60953 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDC42P60953 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.96■□□□□ 0.15
CDC42P60953 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDC42P60953 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.96■□□□□ 0.15
CDC42P60953 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.96■□□□□ 0.15
CDC42P60953 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CDC42P60953 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
CDC42P60953 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
CDC42P60953 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
CDC42P60953 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
CDC42P60953 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.95■□□□□ 0.14
CDC42P60953 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDC42P60953 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CDC42P60953 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDC42P60953 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms