Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.02■□□□□ -0
AP3S2P59780 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC15.02■□□□□ -0
AP3S2P59780 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC15.02■□□□□ -0
AP3S2P59780 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC15.02■□□□□ -0
AP3S2P59780 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC15.02■□□□□ -0
AP3S2P59780 MTDHP1-201ENST00000605323 784 ntBASIC15.02■□□□□ -0
AP3S2P59780 AC083880.1-201ENST00000608266 535 ntBASIC15.02■□□□□ -0
AP3S2P59780 ABBA01031674.1-201ENST00000635145 728 ntBASIC15.02■□□□□ -0
AP3S2P59780 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
AP3S2P59780 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
AP3S2P59780 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
AP3S2P59780 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
AP3S2P59780 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.02□□□□□ -0.01
AP3S2P59780 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
AP3S2P59780 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
AP3S2P59780 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
AP3S2P59780 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
AP3S2P59780 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
AP3S2P59780 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
AP3S2P59780 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
AP3S2P59780 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.02□□□□□ -0.01
AP3S2P59780 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.02□□□□□ -0.01
AP3S2P59780 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
AP3S2P59780 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
AP3S2P59780 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
AP3S2P59780 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.01□□□□□ -0.01
AP3S2P59780 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP3S2P59780 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP3S2P59780 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP3S2P59780 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.01□□□□□ -0.01
AP3S2P59780 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.01□□□□□ -0.01
AP3S2P59780 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
AP3S2P59780 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP3S2P59780 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC15.01□□□□□ -0.01
AP3S2P59780 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP3S2P59780 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
AP3S2P59780 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP3S2P59780 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
AP3S2P59780 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
AP3S2P59780 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
AP3S2P59780 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC15.01□□□□□ -0.01
AP3S2P59780 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC15.01□□□□□ -0.01
AP3S2P59780 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC15.01□□□□□ -0.01
AP3S2P59780 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC15.01□□□□□ -0.01
AP3S2P59780 INO80E-214ENST00000620599 515 ntTSL 2 BASIC15.01□□□□□ -0.01
AP3S2P59780 PFKL-212ENST00000628044 129 ntTSL 3 BASIC15.01□□□□□ -0.01
AP3S2P59780 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC15.01□□□□□ -0.01
AP3S2P59780 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
AP3S2P59780 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP3S2P59780 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.01□□□□□ -0.01
AP3S2P59780 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
AP3S2P59780 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
AP3S2P59780 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.01□□□□□ -0.01
AP3S2P59780 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
AP3S2P59780 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
AP3S2P59780 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
AP3S2P59780 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.01□□□□□ -0.01
AP3S2P59780 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC15.01□□□□□ -0.01
AP3S2P59780 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP3S2P59780 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
AP3S2P59780 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP3S2P59780 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15□□□□□ -0.01
AP3S2P59780 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
AP3S2P59780 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
AP3S2P59780 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15□□□□□ -0.01
AP3S2P59780 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
AP3S2P59780 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15□□□□□ -0.01
AP3S2P59780 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
AP3S2P59780 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15□□□□□ -0.01
AP3S2P59780 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP3S2P59780 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
AP3S2P59780 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP3S2P59780 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP3S2P59780 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP3S2P59780 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP3S2P59780 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP3S2P59780 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15□□□□□ -0.01
AP3S2P59780 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
AP3S2P59780 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
AP3S2P59780 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
AP3S2P59780 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC15□□□□□ -0.01
AP3S2P59780 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC15□□□□□ -0.01
AP3S2P59780 AC239809.2-201ENST00000415381 517 ntBASIC15□□□□□ -0.01
AP3S2P59780 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC15□□□□□ -0.01
AP3S2P59780 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC15□□□□□ -0.01
AP3S2P59780 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC15□□□□□ -0.01
AP3S2P59780 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC15□□□□□ -0.01
AP3S2P59780 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC15□□□□□ -0.01
AP3S2P59780 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15□□□□□ -0.01
AP3S2P59780 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
AP3S2P59780 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15□□□□□ -0.01
AP3S2P59780 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15□□□□□ -0.01
AP3S2P59780 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
AP3S2P59780 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
AP3S2P59780 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP3S2P59780 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP3S2P59780 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
AP3S2P59780 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15□□□□□ -0.01
AP3S2P59780 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC15□□□□□ -0.01
AP3S2P59780 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 117.3 ms