Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.62■□□□□ 0.41
WNT3AP56704 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
WNT3AP56704 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.62■□□□□ 0.41
WNT3AP56704 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
WNT3AP56704 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.62■□□□□ 0.41
WNT3AP56704 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
WNT3AP56704 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
WNT3AP56704 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
WNT3AP56704 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
WNT3AP56704 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
WNT3AP56704 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
WNT3AP56704 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
WNT3AP56704 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
WNT3AP56704 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
WNT3AP56704 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
WNT3AP56704 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
WNT3AP56704 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
WNT3AP56704 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
WNT3AP56704 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
WNT3AP56704 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
WNT3AP56704 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
WNT3AP56704 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
WNT3AP56704 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
WNT3AP56704 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
WNT3AP56704 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
WNT3AP56704 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
WNT3AP56704 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
WNT3AP56704 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
WNT3AP56704 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
WNT3AP56704 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
WNT3AP56704 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
WNT3AP56704 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
WNT3AP56704 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.61■□□□□ 0.41
WNT3AP56704 AC132008.2-207ENST00000454517 770 ntBASIC17.61■□□□□ 0.41
WNT3AP56704 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.61■□□□□ 0.41
WNT3AP56704 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.61■□□□□ 0.41
WNT3AP56704 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
WNT3AP56704 AL732292.2-201ENST00000609649 430 ntBASIC17.61■□□□□ 0.41
WNT3AP56704 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
WNT3AP56704 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
WNT3AP56704 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
WNT3AP56704 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
WNT3AP56704 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
WNT3AP56704 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
WNT3AP56704 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
WNT3AP56704 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
WNT3AP56704 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
WNT3AP56704 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
WNT3AP56704 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
WNT3AP56704 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
WNT3AP56704 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.6■□□□□ 0.41
WNT3AP56704 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
WNT3AP56704 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
WNT3AP56704 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.6■□□□□ 0.41
WNT3AP56704 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.6■□□□□ 0.41
WNT3AP56704 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
WNT3AP56704 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
WNT3AP56704 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
WNT3AP56704 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
WNT3AP56704 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.6■□□□□ 0.41
WNT3AP56704 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
WNT3AP56704 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
WNT3AP56704 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
WNT3AP56704 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
WNT3AP56704 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
WNT3AP56704 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
WNT3AP56704 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
WNT3AP56704 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.6■□□□□ 0.41
WNT3AP56704 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.6■□□□□ 0.41
WNT3AP56704 PRELID1P1-202ENST00000567272 903 ntBASIC17.6■□□□□ 0.41
WNT3AP56704 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.6■□□□□ 0.41
WNT3AP56704 AL121772.3-201ENST00000610840 674 ntBASIC17.6■□□□□ 0.41
WNT3AP56704 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.6■□□□□ 0.41
WNT3AP56704 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
WNT3AP56704 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
WNT3AP56704 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
WNT3AP56704 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
WNT3AP56704 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
WNT3AP56704 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
WNT3AP56704 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
WNT3AP56704 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
WNT3AP56704 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
WNT3AP56704 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
WNT3AP56704 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
WNT3AP56704 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
WNT3AP56704 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
WNT3AP56704 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
WNT3AP56704 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
WNT3AP56704 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
WNT3AP56704 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
WNT3AP56704 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
WNT3AP56704 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
WNT3AP56704 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
WNT3AP56704 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.59■□□□□ 0.41
WNT3AP56704 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
WNT3AP56704 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
WNT3AP56704 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC17.59■□□□□ 0.41
WNT3AP56704 AL135999.2-201ENST00000622438 1686 ntBASIC17.59■□□□□ 0.41
WNT3AP56704 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
WNT3AP56704 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms