Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
APOC4P55056 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
APOC4P55056 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOC4P55056 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOC4P55056 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
APOC4P55056 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOC4P55056 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC12.78□□□□□ -0.36
APOC4P55056 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC12.78□□□□□ -0.36
APOC4P55056 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC12.78□□□□□ -0.36
APOC4P55056 AC106730.1-201ENST00000566722 1090 ntBASIC12.78□□□□□ -0.36
APOC4P55056 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOC4P55056 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOC4P55056 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
APOC4P55056 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOC4P55056 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
APOC4P55056 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOC4P55056 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
APOC4P55056 GID4-202ENST00000376345 1391 ntTSL 3 BASIC12.78□□□□□ -0.36
APOC4P55056 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC12.78□□□□□ -0.36
APOC4P55056 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
APOC4P55056 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
APOC4P55056 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
APOC4P55056 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
APOC4P55056 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOC4P55056 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
APOC4P55056 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
APOC4P55056 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOC4P55056 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOC4P55056 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
APOC4P55056 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
APOC4P55056 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
APOC4P55056 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC12.77□□□□□ -0.36
APOC4P55056 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
APOC4P55056 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC12.77□□□□□ -0.36
APOC4P55056 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
APOC4P55056 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
APOC4P55056 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC12.77□□□□□ -0.36
APOC4P55056 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
APOC4P55056 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC12.77□□□□□ -0.36
APOC4P55056 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
APOC4P55056 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOC4P55056 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC12.77□□□□□ -0.37
APOC4P55056 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOC4P55056 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC12.77□□□□□ -0.37
APOC4P55056 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC12.77□□□□□ -0.37
APOC4P55056 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
APOC4P55056 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOC4P55056 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC12.77□□□□□ -0.37
APOC4P55056 CSF3-203ENST00000394148 622 ntTSL 3 BASIC12.77□□□□□ -0.37
APOC4P55056 AL591424.1-201ENST00000442569 1213 ntBASIC12.77□□□□□ -0.37
APOC4P55056 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
APOC4P55056 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC12.77□□□□□ -0.37
APOC4P55056 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC12.77□□□□□ -0.37
APOC4P55056 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC12.77□□□□□ -0.37
APOC4P55056 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
APOC4P55056 Z83851.2-201ENST00000609564 659 ntBASIC12.77□□□□□ -0.37
APOC4P55056 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOC4P55056 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOC4P55056 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
APOC4P55056 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC12.77□□□□□ -0.37
APOC4P55056 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC12.77□□□□□ -0.37
APOC4P55056 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOC4P55056 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOC4P55056 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
APOC4P55056 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
APOC4P55056 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
APOC4P55056 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
APOC4P55056 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOC4P55056 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
APOC4P55056 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
APOC4P55056 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
APOC4P55056 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOC4P55056 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOC4P55056 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOC4P55056 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOC4P55056 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOC4P55056 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
APOC4P55056 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
APOC4P55056 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOC4P55056 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
APOC4P55056 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
APOC4P55056 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOC4P55056 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOC4P55056 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOC4P55056 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOC4P55056 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC12.76□□□□□ -0.37
APOC4P55056 AC004817.3-201ENST00000602957 2129 ntBASIC12.76□□□□□ -0.37
APOC4P55056 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
APOC4P55056 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOC4P55056 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
APOC4P55056 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC12.76□□□□□ -0.37
APOC4P55056 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
APOC4P55056 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOC4P55056 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
APOC4P55056 ENSA-206ENST00000361631 725 ntTSL 2 BASIC12.76□□□□□ -0.37
APOC4P55056 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
APOC4P55056 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
APOC4P55056 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
APOC4P55056 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC12.76□□□□□ -0.37
APOC4P55056 AP000347.1-202ENST00000435868 847 ntBASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms