Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 SLC25A6P5-201ENST00000435663 894 ntBASIC18.49■□□□□ 0.55
CACNA2D1P54289 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.49■□□□□ 0.55
CACNA2D1P54289 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.49■□□□□ 0.55
CACNA2D1P54289 AC002558.1-201ENST00000488906 803 ntBASIC18.49■□□□□ 0.55
CACNA2D1P54289 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.49■□□□□ 0.55
CACNA2D1P54289 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.49■□□□□ 0.55
CACNA2D1P54289 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.49■□□□□ 0.55
CACNA2D1P54289 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.49■□□□□ 0.55
CACNA2D1P54289 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.49■□□□□ 0.55
CACNA2D1P54289 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.49■□□□□ 0.55
CACNA2D1P54289 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CACNA2D1P54289 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CACNA2D1P54289 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CACNA2D1P54289 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CACNA2D1P54289 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CACNA2D1P54289 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.49■□□□□ 0.55
CACNA2D1P54289 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CACNA2D1P54289 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.49■□□□□ 0.55
CACNA2D1P54289 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CACNA2D1P54289 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CACNA2D1P54289 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.48■□□□□ 0.55
CACNA2D1P54289 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CACNA2D1P54289 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CACNA2D1P54289 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CACNA2D1P54289 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CACNA2D1P54289 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.48■□□□□ 0.55
CACNA2D1P54289 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CACNA2D1P54289 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.48■□□□□ 0.55
CACNA2D1P54289 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CACNA2D1P54289 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.48■□□□□ 0.55
CACNA2D1P54289 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CACNA2D1P54289 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CACNA2D1P54289 AL020989.1-201ENST00000422979 469 ntBASIC18.48■□□□□ 0.55
CACNA2D1P54289 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
CACNA2D1P54289 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.48■□□□□ 0.55
CACNA2D1P54289 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.48■□□□□ 0.55
CACNA2D1P54289 SLC25A1P1-201ENST00000528351 927 ntBASIC18.48■□□□□ 0.55
CACNA2D1P54289 OR7E14P-202ENST00000530490 1290 ntBASIC18.48■□□□□ 0.55
CACNA2D1P54289 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.48■□□□□ 0.55
CACNA2D1P54289 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.48■□□□□ 0.55
CACNA2D1P54289 AL022326.1-202ENST00000641533 845 ntBASIC18.48■□□□□ 0.55
CACNA2D1P54289 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
CACNA2D1P54289 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CACNA2D1P54289 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
CACNA2D1P54289 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CACNA2D1P54289 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CACNA2D1P54289 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CACNA2D1P54289 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.48■□□□□ 0.55
CACNA2D1P54289 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CACNA2D1P54289 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CACNA2D1P54289 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CACNA2D1P54289 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CACNA2D1P54289 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
CACNA2D1P54289 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
CACNA2D1P54289 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CACNA2D1P54289 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CACNA2D1P54289 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CACNA2D1P54289 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.47■□□□□ 0.55
CACNA2D1P54289 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CACNA2D1P54289 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CACNA2D1P54289 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.47■□□□□ 0.55
CACNA2D1P54289 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CACNA2D1P54289 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CACNA2D1P54289 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CACNA2D1P54289 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CACNA2D1P54289 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.47■□□□□ 0.55
CACNA2D1P54289 AC003669.1-201ENST00000334569 611 ntBASIC18.47■□□□□ 0.55
CACNA2D1P54289 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.47■□□□□ 0.55
CACNA2D1P54289 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CACNA2D1P54289 AL590627.1-203ENST00000421194 1026 ntBASIC18.47■□□□□ 0.55
CACNA2D1P54289 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CACNA2D1P54289 IGHV3-52-201ENST00000519770 353 ntBASIC18.47■□□□□ 0.55
CACNA2D1P54289 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.47■□□□□ 0.55
CACNA2D1P54289 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.47■□□□□ 0.55
CACNA2D1P54289 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.47■□□□□ 0.55
CACNA2D1P54289 AC120114.3-201ENST00000611923 658 ntBASIC18.47■□□□□ 0.55
CACNA2D1P54289 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
CACNA2D1P54289 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.47■□□□□ 0.55
CACNA2D1P54289 AC116407.3-201ENST00000623905 1129 ntBASIC18.47■□□□□ 0.55
CACNA2D1P54289 AC107918.4-202ENST00000641623 219 ntBASIC18.47■□□□□ 0.55
CACNA2D1P54289 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CACNA2D1P54289 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CACNA2D1P54289 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.47■□□□□ 0.55
CACNA2D1P54289 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CACNA2D1P54289 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CACNA2D1P54289 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
CACNA2D1P54289 IL9RP2-201ENST00000423948 1312 ntBASIC18.47■□□□□ 0.55
CACNA2D1P54289 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CACNA2D1P54289 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.46■□□□□ 0.55
CACNA2D1P54289 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CACNA2D1P54289 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CACNA2D1P54289 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.46■□□□□ 0.55
CACNA2D1P54289 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
CACNA2D1P54289 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.46■□□□□ 0.55
CACNA2D1P54289 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CACNA2D1P54289 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.46■□□□□ 0.55
CACNA2D1P54289 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CACNA2D1P54289 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.46■□□□□ 0.55
CACNA2D1P54289 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CACNA2D1P54289 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms