Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDK7P50613 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CDK7P50613 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDK7P50613 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC19.19■□□□□ 0.66
CDK7P50613 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CDK7P50613 IGHV3OR16-6-201ENST00000568775 360 ntBASIC19.19■□□□□ 0.66
CDK7P50613 ACTL9-202ENST00000612068 1252 ntBASIC19.19■□□□□ 0.66
CDK7P50613 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC19.19■□□□□ 0.66
CDK7P50613 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.19■□□□□ 0.66
CDK7P50613 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC19.19■□□□□ 0.66
CDK7P50613 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDK7P50613 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDK7P50613 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDK7P50613 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDK7P50613 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CDK7P50613 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDK7P50613 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.19■□□□□ 0.66
CDK7P50613 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDK7P50613 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDK7P50613 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDK7P50613 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDK7P50613 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CDK7P50613 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CDK7P50613 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CDK7P50613 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CDK7P50613 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDK7P50613 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDK7P50613 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC19.18■□□□□ 0.66
CDK7P50613 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDK7P50613 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.18■□□□□ 0.66
CDK7P50613 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CDK7P50613 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDK7P50613 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDK7P50613 AC244107.1-201ENST00000442033 332 ntBASIC19.18■□□□□ 0.66
CDK7P50613 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC19.18■□□□□ 0.66
CDK7P50613 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.18■□□□□ 0.66
CDK7P50613 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDK7P50613 MIR4745-201ENST00000577608 62 ntBASIC19.18■□□□□ 0.66
CDK7P50613 AL390955.2-201ENST00000603032 514 ntBASIC19.18■□□□□ 0.66
CDK7P50613 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CDK7P50613 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDK7P50613 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDK7P50613 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDK7P50613 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDK7P50613 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDK7P50613 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CDK7P50613 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CDK7P50613 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CDK7P50613 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.18■□□□□ 0.66
CDK7P50613 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CDK7P50613 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CDK7P50613 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.18■□□□□ 0.66
CDK7P50613 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDK7P50613 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
CDK7P50613 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.17■□□□□ 0.66
CDK7P50613 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDK7P50613 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDK7P50613 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDK7P50613 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDK7P50613 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
CDK7P50613 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC19.17■□□□□ 0.66
CDK7P50613 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDK7P50613 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDK7P50613 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC19.17■□□□□ 0.66
CDK7P50613 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDK7P50613 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.17■□□□□ 0.66
CDK7P50613 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CDK7P50613 AC112191.1-201ENST00000523689 701 ntBASIC19.17■□□□□ 0.66
CDK7P50613 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDK7P50613 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC19.17■□□□□ 0.66
CDK7P50613 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.17■□□□□ 0.66
CDK7P50613 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.17■□□□□ 0.66
CDK7P50613 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDK7P50613 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CDK7P50613 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDK7P50613 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.17■□□□□ 0.66
CDK7P50613 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
CDK7P50613 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CDK7P50613 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.17■□□□□ 0.66
CDK7P50613 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CDK7P50613 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.16■□□□□ 0.66
CDK7P50613 AC020916.1-201ENST00000587762 1774 ntBASIC19.16■□□□□ 0.66
CDK7P50613 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDK7P50613 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDK7P50613 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CDK7P50613 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDK7P50613 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.16■□□□□ 0.66
CDK7P50613 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDK7P50613 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
CDK7P50613 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDK7P50613 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDK7P50613 MYCLP1-201ENST00000372451 1075 ntBASIC19.16■□□□□ 0.66
CDK7P50613 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CDK7P50613 PNKD-204ENST00000436005 978 ntTSL 5 BASIC19.16■□□□□ 0.66
CDK7P50613 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC19.16■□□□□ 0.66
CDK7P50613 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.16■□□□□ 0.66
CDK7P50613 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.16■□□□□ 0.66
CDK7P50613 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CDK7P50613 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CDK7P50613 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms