Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDC34P49427 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDC34P49427 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDC34P49427 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CDC34P49427 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDC34P49427 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC13.82□□□□□ -0.2
CDC34P49427 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDC34P49427 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC13.82□□□□□ -0.2
CDC34P49427 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC13.82□□□□□ -0.2
CDC34P49427 RNF121-214ENST00000533380 870 ntTSL 3 BASIC13.82□□□□□ -0.2
CDC34P49427 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDC34P49427 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC13.82□□□□□ -0.2
CDC34P49427 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDC34P49427 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDC34P49427 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDC34P49427 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDC34P49427 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CDC34P49427 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC13.82□□□□□ -0.2
CDC34P49427 PCDHB17P-201ENST00000539533 2393 ntBASIC13.82□□□□□ -0.2
CDC34P49427 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDC34P49427 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDC34P49427 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDC34P49427 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDC34P49427 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CDC34P49427 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CDC34P49427 AC079328.2-201ENST00000561241 3354 ntBASIC13.82□□□□□ -0.2
CDC34P49427 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDC34P49427 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDC34P49427 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDC34P49427 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDC34P49427 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDC34P49427 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDC34P49427 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CDC34P49427 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
CDC34P49427 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CDC34P49427 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CDC34P49427 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC13.81□□□□□ -0.2
CDC34P49427 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
CDC34P49427 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDC34P49427 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CDC34P49427 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC13.81□□□□□ -0.2
CDC34P49427 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDC34P49427 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC13.81□□□□□ -0.2
CDC34P49427 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDC34P49427 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDC34P49427 ISG20-202ENST00000379224 540 ntTSL 3 BASIC13.81□□□□□ -0.2
CDC34P49427 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
CDC34P49427 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC13.81□□□□□ -0.2
CDC34P49427 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC13.81□□□□□ -0.2
CDC34P49427 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC13.81□□□□□ -0.2
CDC34P49427 DGCR10-201ENST00000609839 495 ntBASIC13.81□□□□□ -0.2
CDC34P49427 AC112497.1-201ENST00000624824 639 ntBASIC13.81□□□□□ -0.2
CDC34P49427 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CDC34P49427 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDC34P49427 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDC34P49427 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC13.81□□□□□ -0.2
CDC34P49427 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDC34P49427 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDC34P49427 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDC34P49427 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13.81□□□□□ -0.2
CDC34P49427 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDC34P49427 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDC34P49427 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CDC34P49427 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDC34P49427 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDC34P49427 LINC00167-201ENST00000530583 1419 ntBASIC13.81□□□□□ -0.2
CDC34P49427 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDC34P49427 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CDC34P49427 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CDC34P49427 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC13.8□□□□□ -0.2
CDC34P49427 MED29-202ENST00000594368 1471 ntTSL 2 BASIC13.8□□□□□ -0.2
CDC34P49427 FRMD6-AS1-201ENST00000617151 2229 ntBASIC13.8□□□□□ -0.2
CDC34P49427 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
CDC34P49427 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDC34P49427 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC13.8□□□□□ -0.2
CDC34P49427 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CDC34P49427 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CDC34P49427 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC13.8□□□□□ -0.2
CDC34P49427 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDC34P49427 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CDC34P49427 AC006449.5-201ENST00000610658 2098 ntBASIC13.8□□□□□ -0.2
CDC34P49427 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDC34P49427 MESTP1-201ENST00000404287 994 ntBASIC13.8□□□□□ -0.2
CDC34P49427 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CDC34P49427 GLI3-203ENST00000437480 451 ntTSL 2 BASIC13.8□□□□□ -0.2
CDC34P49427 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CDC34P49427 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC13.8□□□□□ -0.2
CDC34P49427 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC13.8□□□□□ -0.2
CDC34P49427 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC13.8□□□□□ -0.2
CDC34P49427 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
CDC34P49427 CYGB-204ENST00000589342 815 ntTSL 3 BASIC13.8□□□□□ -0.2
CDC34P49427 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC13.8□□□□□ -0.2
CDC34P49427 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
CDC34P49427 AL109923.1-201ENST00000618799 583 ntBASIC13.8□□□□□ -0.2
CDC34P49427 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDC34P49427 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDC34P49427 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDC34P49427 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CDC34P49427 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CDC34P49427 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms