Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.22■□□□□ 0.67
RFC5P40937 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFC5P40937 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.22■□□□□ 0.67
RFC5P40937 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RFC5P40937 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFC5P40937 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RFC5P40937 AC104109.2-201ENST00000602919 1418 ntBASIC19.22■□□□□ 0.67
RFC5P40937 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFC5P40937 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFC5P40937 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFC5P40937 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.22■□□□□ 0.67
RFC5P40937 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RFC5P40937 PCDHB18P-201ENST00000524813 2368 ntBASIC19.21■□□□□ 0.67
RFC5P40937 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
RFC5P40937 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
RFC5P40937 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RFC5P40937 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFC5P40937 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC19.21■□□□□ 0.67
RFC5P40937 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.21■□□□□ 0.67
RFC5P40937 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFC5P40937 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.21■□□□□ 0.67
RFC5P40937 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.21■□□□□ 0.67
RFC5P40937 PMS2P1-201ENST00000431037 1228 ntBASIC19.21■□□□□ 0.67
RFC5P40937 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC19.21■□□□□ 0.67
RFC5P40937 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC19.21■□□□□ 0.67
RFC5P40937 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC19.21■□□□□ 0.67
RFC5P40937 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.21■□□□□ 0.67
RFC5P40937 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFC5P40937 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFC5P40937 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFC5P40937 NOC2LP2-201ENST00000407594 1944 ntBASIC19.21■□□□□ 0.67
RFC5P40937 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RFC5P40937 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFC5P40937 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.2■□□□□ 0.66
RFC5P40937 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
RFC5P40937 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
RFC5P40937 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC19.2■□□□□ 0.66
RFC5P40937 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RFC5P40937 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
RFC5P40937 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RFC5P40937 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.2■□□□□ 0.66
RFC5P40937 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFC5P40937 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RFC5P40937 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RFC5P40937 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.2■□□□□ 0.66
RFC5P40937 PIN1-206ENST00000587625 878 ntTSL 2 BASIC19.2■□□□□ 0.66
RFC5P40937 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFC5P40937 AL805961.1-202ENST00000641562 540 ntBASIC19.2■□□□□ 0.66
RFC5P40937 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFC5P40937 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFC5P40937 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFC5P40937 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFC5P40937 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.2■□□□□ 0.66
RFC5P40937 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC19.2■□□□□ 0.66
RFC5P40937 AC134043.2-201ENST00000624206 2238 ntBASIC19.2■□□□□ 0.66
RFC5P40937 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RFC5P40937 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFC5P40937 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.2■□□□□ 0.66
RFC5P40937 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFC5P40937 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RFC5P40937 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFC5P40937 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RFC5P40937 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RFC5P40937 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
RFC5P40937 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RFC5P40937 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RFC5P40937 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RFC5P40937 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.19■□□□□ 0.66
RFC5P40937 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RFC5P40937 AL133373.2-201ENST00000623187 2828 ntBASIC19.19■□□□□ 0.66
RFC5P40937 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RFC5P40937 MIR574-201ENST00000385209 96 ntBASIC19.19■□□□□ 0.66
RFC5P40937 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RFC5P40937 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RFC5P40937 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.19■□□□□ 0.66
RFC5P40937 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RFC5P40937 AC009947.1-201ENST00000444350 727 ntBASIC19.19■□□□□ 0.66
RFC5P40937 RPS15P9-201ENST00000494093 319 ntBASIC19.19■□□□□ 0.66
RFC5P40937 KRT18P58-201ENST00000527480 1120 ntBASIC19.19■□□□□ 0.66
RFC5P40937 AC034105.1-201ENST00000563488 319 ntBASIC19.19■□□□□ 0.66
RFC5P40937 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RFC5P40937 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.19■□□□□ 0.66
RFC5P40937 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RFC5P40937 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RFC5P40937 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.19■□□□□ 0.66
RFC5P40937 AC018470.1-201ENST00000624790 3129 ntBASIC19.19■□□□□ 0.66
RFC5P40937 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.19■□□□□ 0.66
RFC5P40937 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
RFC5P40937 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RFC5P40937 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
RFC5P40937 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RFC5P40937 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RFC5P40937 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.18■□□□□ 0.66
RFC5P40937 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
RFC5P40937 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RFC5P40937 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RFC5P40937 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.18■□□□□ 0.66
RFC5P40937 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.18■□□□□ 0.66
RFC5P40937 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RFC5P40937 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms