Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CLCN1P35523 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLCN1P35523 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLCN1P35523 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLCN1P35523 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLCN1P35523 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLCN1P35523 GMCL1P1-201ENST00000463439 1581 ntBASIC19.87■□□□□ 0.77
CLCN1P35523 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC19.87■□□□□ 0.77
CLCN1P35523 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLCN1P35523 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC19.86■□□□□ 0.77
CLCN1P35523 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
CLCN1P35523 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLCN1P35523 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CLCN1P35523 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLCN1P35523 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLCN1P35523 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC19.86■□□□□ 0.77
CLCN1P35523 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLCN1P35523 TSPY14P-201ENST00000303979 915 ntBASIC19.86■□□□□ 0.77
CLCN1P35523 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.86■□□□□ 0.77
CLCN1P35523 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC19.86■□□□□ 0.77
CLCN1P35523 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.86■□□□□ 0.77
CLCN1P35523 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.86■□□□□ 0.77
CLCN1P35523 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.86■□□□□ 0.77
CLCN1P35523 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLCN1P35523 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CLCN1P35523 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC19.86■□□□□ 0.77
CLCN1P35523 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLCN1P35523 AC036111.1-201ENST00000533973 1582 ntBASIC19.86■□□□□ 0.77
CLCN1P35523 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.86■□□□□ 0.77
CLCN1P35523 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CLCN1P35523 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC19.86■□□□□ 0.77
CLCN1P35523 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLCN1P35523 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC19.85■□□□□ 0.77
CLCN1P35523 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLCN1P35523 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CLCN1P35523 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.85■□□□□ 0.77
CLCN1P35523 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLCN1P35523 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
CLCN1P35523 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
CLCN1P35523 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLCN1P35523 AC034236.2-201ENST00000606662 1610 ntBASIC19.85■□□□□ 0.77
CLCN1P35523 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLCN1P35523 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLCN1P35523 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLCN1P35523 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLCN1P35523 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLCN1P35523 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CLCN1P35523 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.85■□□□□ 0.77
CLCN1P35523 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.85■□□□□ 0.77
CLCN1P35523 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.85■□□□□ 0.77
CLCN1P35523 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.85■□□□□ 0.77
CLCN1P35523 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CLCN1P35523 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.85■□□□□ 0.77
CLCN1P35523 AC010947.1-201ENST00000623454 693 ntBASIC19.85■□□□□ 0.77
CLCN1P35523 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLCN1P35523 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CLCN1P35523 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLCN1P35523 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.85■□□□□ 0.77
CLCN1P35523 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC19.85■□□□□ 0.77
CLCN1P35523 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CLCN1P35523 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC19.85■□□□□ 0.77
CLCN1P35523 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.85■□□□□ 0.77
CLCN1P35523 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC19.85■□□□□ 0.77
CLCN1P35523 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CLCN1P35523 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC19.85■□□□□ 0.77
CLCN1P35523 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLCN1P35523 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLCN1P35523 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLCN1P35523 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC19.84■□□□□ 0.77
CLCN1P35523 AC092171.3-201ENST00000610122 2651 ntBASIC19.84■□□□□ 0.77
CLCN1P35523 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLCN1P35523 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
CLCN1P35523 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLCN1P35523 FES-204ENST00000414248 2327 ntTSL 2 BASIC19.84■□□□□ 0.77
CLCN1P35523 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CLCN1P35523 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLCN1P35523 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.84■□□□□ 0.77
CLCN1P35523 CCR12P-201ENST00000446203 998 ntBASIC19.84■□□□□ 0.77
CLCN1P35523 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.84■□□□□ 0.77
CLCN1P35523 C2orf69P3-201ENST00000565542 1120 ntBASIC19.84■□□□□ 0.77
CLCN1P35523 CR769767.2-201ENST00000622735 460 ntBASIC19.84■□□□□ 0.77
CLCN1P35523 AC116562.4-202ENST00000641738 218 ntBASIC19.84■□□□□ 0.77
CLCN1P35523 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLCN1P35523 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.84■□□□□ 0.77
CLCN1P35523 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC19.84■□□□□ 0.77
CLCN1P35523 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CLCN1P35523 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC19.84■□□□□ 0.77
CLCN1P35523 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.84■□□□□ 0.77
CLCN1P35523 KRT8P50-201ENST00000562022 1438 ntBASIC19.84■□□□□ 0.77
CLCN1P35523 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
CLCN1P35523 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLCN1P35523 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CLCN1P35523 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLCN1P35523 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
CLCN1P35523 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CLCN1P35523 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLCN1P35523 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLCN1P35523 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLCN1P35523 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLCN1P35523 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms