Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP24386 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP24386 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP24386 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHMP24386 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CHMP24386 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.33■□□□□ 0.21
CHMP24386 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CHMP24386 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CHMP24386 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CHMP24386 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.21
CHMP24386 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CHMP24386 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP24386 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.33■□□□□ 0.2
CHMP24386 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP24386 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.33■□□□□ 0.2
CHMP24386 VENTXP7-201ENST00000475503 772 ntBASIC16.33■□□□□ 0.2
CHMP24386 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.33■□□□□ 0.2
CHMP24386 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.33■□□□□ 0.2
CHMP24386 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.33■□□□□ 0.2
CHMP24386 KRT126P-201ENST00000549467 1181 ntBASIC16.33■□□□□ 0.2
CHMP24386 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.33■□□□□ 0.2
CHMP24386 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.33■□□□□ 0.2
CHMP24386 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
CHMP24386 MIR3652-201ENST00000579335 131 ntBASIC16.33■□□□□ 0.2
CHMP24386 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CHMP24386 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.33■□□□□ 0.2
CHMP24386 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP24386 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.33■□□□□ 0.2
CHMP24386 AC009154.2-201ENST00000621177 724 ntBASIC16.33■□□□□ 0.2
CHMP24386 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CHMP24386 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.33■□□□□ 0.2
CHMP24386 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CHMP24386 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP24386 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP24386 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
CHMP24386 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP24386 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP24386 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.33■□□□□ 0.2
CHMP24386 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.33■□□□□ 0.2
CHMP24386 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP24386 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP24386 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP24386 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP24386 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP24386 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CHMP24386 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP24386 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CHMP24386 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.33■□□□□ 0.2
CHMP24386 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CHMP24386 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP24386 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.32■□□□□ 0.2
CHMP24386 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP24386 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP24386 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP24386 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CHMP24386 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP24386 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP24386 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CHMP24386 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP24386 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP24386 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP24386 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
CHMP24386 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP24386 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP24386 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP24386 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.32■□□□□ 0.2
CHMP24386 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP24386 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP24386 AC246785.2-201ENST00000432512 513 ntBASIC16.32■□□□□ 0.2
CHMP24386 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP24386 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.32■□□□□ 0.2
CHMP24386 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.32■□□□□ 0.2
CHMP24386 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP24386 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP24386 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP24386 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CHMP24386 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.32■□□□□ 0.2
CHMP24386 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.32■□□□□ 0.2
CHMP24386 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.32■□□□□ 0.2
CHMP24386 AC022898.2-201ENST00000616822 1312 ntBASIC16.32■□□□□ 0.2
CHMP24386 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP24386 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.32■□□□□ 0.2
CHMP24386 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP24386 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP24386 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP24386 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHMP24386 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CHMP24386 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP24386 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP24386 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP24386 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP24386 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP24386 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP24386 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP24386 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP24386 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP24386 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CHMP24386 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.31■□□□□ 0.2
CHMP24386 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.31■□□□□ 0.2
CHMP24386 KRT18P65-201ENST00000439811 1286 ntBASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms