Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15□□□□□ -0.01
CCL1P22362 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15□□□□□ -0.01
CCL1P22362 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CCL1P22362 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCL1P22362 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CCL1P22362 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15□□□□□ -0.01
CCL1P22362 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCL1P22362 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15□□□□□ -0.01
CCL1P22362 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CCL1P22362 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CCL1P22362 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15□□□□□ -0.01
CCL1P22362 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15□□□□□ -0.01
CCL1P22362 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCL1P22362 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCL1P22362 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CCL1P22362 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCL1P22362 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCL1P22362 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCL1P22362 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCL1P22362 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCL1P22362 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15□□□□□ -0.01
CCL1P22362 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCL1P22362 AL031133.1-201ENST00000406807 723 ntBASIC15□□□□□ -0.01
CCL1P22362 TMPOP1-202ENST00000424642 1267 ntBASIC15□□□□□ -0.01
CCL1P22362 CHCHD2P8-201ENST00000429873 447 ntBASIC15□□□□□ -0.01
CCL1P22362 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCL1P22362 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCL1P22362 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCL1P22362 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
CCL1P22362 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CCL1P22362 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC15□□□□□ -0.01
CCL1P22362 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CCL1P22362 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCL1P22362 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15□□□□□ -0.01
CCL1P22362 MED25-212ENST00000618715 1467 ntTSL 5 BASIC15□□□□□ -0.01
CCL1P22362 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15□□□□□ -0.01
CCL1P22362 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
CCL1P22362 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCL1P22362 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CCL1P22362 AL135999.2-201ENST00000622438 1686 ntBASIC15□□□□□ -0.01
CCL1P22362 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCL1P22362 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCL1P22362 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
CCL1P22362 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCL1P22362 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
CCL1P22362 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCL1P22362 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCL1P22362 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CCL1P22362 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCL1P22362 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCL1P22362 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCL1P22362 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
CCL1P22362 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
CCL1P22362 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.99□□□□□ -0.01
CCL1P22362 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCL1P22362 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CCL1P22362 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC14.99□□□□□ -0.01
CCL1P22362 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC14.99□□□□□ -0.01
CCL1P22362 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCL1P22362 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC14.99□□□□□ -0.01
CCL1P22362 AC091607.1-201ENST00000490318 1060 ntBASIC14.99□□□□□ -0.01
CCL1P22362 STK19B-204ENST00000512515 211 ntBASIC14.99□□□□□ -0.01
CCL1P22362 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CCL1P22362 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC14.99□□□□□ -0.01
CCL1P22362 AL121672.3-201ENST00000608644 468 ntBASIC14.99□□□□□ -0.01
CCL1P22362 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC14.99□□□□□ -0.01
CCL1P22362 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CCL1P22362 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCL1P22362 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCL1P22362 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCL1P22362 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCL1P22362 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCL1P22362 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC14.99□□□□□ -0.01
CCL1P22362 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CCL1P22362 AC132938.5-201ENST00000624980 1813 ntBASIC14.99□□□□□ -0.01
CCL1P22362 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
CCL1P22362 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCL1P22362 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC14.98□□□□□ -0.01
CCL1P22362 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC14.98□□□□□ -0.01
CCL1P22362 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCL1P22362 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.98□□□□□ -0.01
CCL1P22362 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCL1P22362 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
CCL1P22362 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCL1P22362 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CCL1P22362 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCL1P22362 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCL1P22362 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCL1P22362 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.98□□□□□ -0.01
CCL1P22362 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCL1P22362 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCL1P22362 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCL1P22362 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCL1P22362 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCL1P22362 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CCL1P22362 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.98□□□□□ -0.01
CCL1P22362 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC14.98□□□□□ -0.01
CCL1P22362 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CCL1P22362 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC14.98□□□□□ -0.01
CCL1P22362 BX276092.5-203ENST00000456199 560 ntBASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms