Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ATP2A2P16615 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATP2A2P16615 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.27■□□□□ 0.68
ATP2A2P16615 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.27■□□□□ 0.68
ATP2A2P16615 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC19.27■□□□□ 0.68
ATP2A2P16615 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATP2A2P16615 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATP2A2P16615 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATP2A2P16615 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ATP2A2P16615 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.27■□□□□ 0.68
ATP2A2P16615 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.27■□□□□ 0.68
ATP2A2P16615 MKNK2P1-201ENST00000437526 628 ntBASIC19.27■□□□□ 0.68
ATP2A2P16615 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ATP2A2P16615 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC19.27■□□□□ 0.68
ATP2A2P16615 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ATP2A2P16615 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
ATP2A2P16615 AC018845.2-201ENST00000568326 409 ntBASIC19.27■□□□□ 0.68
ATP2A2P16615 MIR4751-201ENST00000578027 74 ntBASIC19.27■□□□□ 0.68
ATP2A2P16615 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATP2A2P16615 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC19.27■□□□□ 0.68
ATP2A2P16615 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
ATP2A2P16615 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
ATP2A2P16615 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ATP2A2P16615 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
ATP2A2P16615 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ATP2A2P16615 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
ATP2A2P16615 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.26■□□□□ 0.67
ATP2A2P16615 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.26■□□□□ 0.67
ATP2A2P16615 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2A2P16615 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
ATP2A2P16615 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC19.26■□□□□ 0.67
ATP2A2P16615 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2A2P16615 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2A2P16615 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
ATP2A2P16615 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2A2P16615 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.26■□□□□ 0.67
ATP2A2P16615 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2A2P16615 ELL2P1-201ENST00000413990 1906 ntBASIC19.26■□□□□ 0.67
ATP2A2P16615 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC19.26■□□□□ 0.67
ATP2A2P16615 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2A2P16615 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
ATP2A2P16615 CEND1P1-201ENST00000451006 455 ntBASIC19.26■□□□□ 0.67
ATP2A2P16615 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.26■□□□□ 0.67
ATP2A2P16615 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC19.26■□□□□ 0.67
ATP2A2P16615 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.26■□□□□ 0.67
ATP2A2P16615 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.26■□□□□ 0.67
ATP2A2P16615 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC19.26■□□□□ 0.67
ATP2A2P16615 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC19.26■□□□□ 0.67
ATP2A2P16615 AL589182.2-201ENST00000619332 1049 ntBASIC19.26■□□□□ 0.67
ATP2A2P16615 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2A2P16615 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC19.26■□□□□ 0.67
ATP2A2P16615 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2A2P16615 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
ATP2A2P16615 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2A2P16615 AL354751.1-201ENST00000412768 1863 ntBASIC19.26■□□□□ 0.67
ATP2A2P16615 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2A2P16615 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
ATP2A2P16615 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2A2P16615 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2A2P16615 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.26■□□□□ 0.67
ATP2A2P16615 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2A2P16615 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATP2A2P16615 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.25■□□□□ 0.67
ATP2A2P16615 SIGLEC16-201ENST00000599858 1437 ntBASIC19.25■□□□□ 0.67
ATP2A2P16615 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ATP2A2P16615 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATP2A2P16615 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ATP2A2P16615 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
ATP2A2P16615 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
ATP2A2P16615 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATP2A2P16615 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
ATP2A2P16615 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATP2A2P16615 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.25■□□□□ 0.67
ATP2A2P16615 AL035633.1-201ENST00000406139 838 ntBASIC19.25■□□□□ 0.67
ATP2A2P16615 SPDYE21P-201ENST00000413323 827 ntBASIC19.25■□□□□ 0.67
ATP2A2P16615 VN2R19P-201ENST00000442399 1052 ntBASIC19.25■□□□□ 0.67
ATP2A2P16615 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC19.25■□□□□ 0.67
ATP2A2P16615 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.25■□□□□ 0.67
ATP2A2P16615 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.25■□□□□ 0.67
ATP2A2P16615 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC19.25■□□□□ 0.67
ATP2A2P16615 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.25■□□□□ 0.67
ATP2A2P16615 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.25■□□□□ 0.67
ATP2A2P16615 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.25■□□□□ 0.67
ATP2A2P16615 AL513190.1-201ENST00000621254 727 ntBASIC19.25■□□□□ 0.67
ATP2A2P16615 AD001527.2-201ENST00000622994 785 ntBASIC19.25■□□□□ 0.67
ATP2A2P16615 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATP2A2P16615 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATP2A2P16615 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC19.25■□□□□ 0.67
ATP2A2P16615 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.25■□□□□ 0.67
ATP2A2P16615 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATP2A2P16615 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
ATP2A2P16615 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATP2A2P16615 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATP2A2P16615 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.24■□□□□ 0.67
ATP2A2P16615 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
ATP2A2P16615 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ATP2A2P16615 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATP2A2P16615 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATP2A2P16615 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.24■□□□□ 0.67
ATP2A2P16615 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms