Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
RARAP10276 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
RARAP10276 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RARAP10276 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RARAP10276 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
RARAP10276 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
RARAP10276 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.31■□□□□ 0.52
RARAP10276 AC002558.1-201ENST00000488906 803 ntBASIC18.31■□□□□ 0.52
RARAP10276 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.31■□□□□ 0.52
RARAP10276 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RARAP10276 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC18.31■□□□□ 0.52
RARAP10276 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
RARAP10276 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.31■□□□□ 0.52
RARAP10276 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.31■□□□□ 0.52
RARAP10276 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RARAP10276 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.31■□□□□ 0.52
RARAP10276 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
RARAP10276 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
RARAP10276 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RARAP10276 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RARAP10276 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RARAP10276 AGGF1P2-201ENST00000426656 2106 ntBASIC18.31■□□□□ 0.52
RARAP10276 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
RARAP10276 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RARAP10276 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.31■□□□□ 0.52
RARAP10276 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RARAP10276 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
RARAP10276 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RARAP10276 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.3■□□□□ 0.52
RARAP10276 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RARAP10276 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RARAP10276 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RARAP10276 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RARAP10276 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RARAP10276 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.3■□□□□ 0.52
RARAP10276 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RARAP10276 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.3■□□□□ 0.52
RARAP10276 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
RARAP10276 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.3■□□□□ 0.52
RARAP10276 AC019129.2-201ENST00000609837 1235 ntBASIC18.3■□□□□ 0.52
RARAP10276 AL139327.4-201ENST00000612362 153 ntBASIC18.3■□□□□ 0.52
RARAP10276 AL358472.4-201ENST00000633140 710 ntBASIC18.3■□□□□ 0.52
RARAP10276 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.3■□□□□ 0.52
RARAP10276 AP000550.4-202ENST00000639755 178 ntBASIC18.3■□□□□ 0.52
RARAP10276 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.3■□□□□ 0.52
RARAP10276 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RARAP10276 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
RARAP10276 AC116353.5-201ENST00000638148 1699 ntBASIC18.3■□□□□ 0.52
RARAP10276 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.3■□□□□ 0.52
RARAP10276 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RARAP10276 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RARAP10276 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
RARAP10276 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.3■□□□□ 0.52
RARAP10276 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RARAP10276 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
RARAP10276 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RARAP10276 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.3■□□□□ 0.52
RARAP10276 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.3■□□□□ 0.52
RARAP10276 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
RARAP10276 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.29■□□□□ 0.52
RARAP10276 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.29■□□□□ 0.52
RARAP10276 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RARAP10276 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
RARAP10276 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.29■□□□□ 0.52
RARAP10276 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.29■□□□□ 0.52
RARAP10276 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
RARAP10276 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RARAP10276 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RARAP10276 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.29■□□□□ 0.52
RARAP10276 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RARAP10276 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RARAP10276 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RARAP10276 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RARAP10276 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RARAP10276 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.29■□□□□ 0.52
RARAP10276 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
RARAP10276 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RARAP10276 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
RARAP10276 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
RARAP10276 TPSP2-201ENST00000561760 610 ntBASIC18.29■□□□□ 0.52
RARAP10276 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.29■□□□□ 0.52
RARAP10276 AL445228.2-201ENST00000605589 952 ntBASIC18.29■□□□□ 0.52
RARAP10276 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.29■□□□□ 0.52
RARAP10276 OR6D1P-202ENST00000641007 5290 ntBASIC18.29■□□□□ 0.52
RARAP10276 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RARAP10276 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RARAP10276 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RARAP10276 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RARAP10276 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
RARAP10276 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RARAP10276 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
RARAP10276 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RARAP10276 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RARAP10276 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
RARAP10276 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.29■□□□□ 0.52
RARAP10276 RHBDF1P1-201ENST00000427504 1941 ntBASIC18.29■□□□□ 0.52
RARAP10276 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RARAP10276 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RARAP10276 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RARAP10276 AC233702.3-201ENST00000578656 1387 ntBASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms