Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CSB-PGBD3P0DP91 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC22.98■■□□□ 1.27
CSB-PGBD3P0DP91 PNKD-204ENST00000436005 978 ntTSL 5 BASIC22.98■■□□□ 1.27
CSB-PGBD3P0DP91 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CSB-PGBD3P0DP91 RPL28-209ENST00000560055 670 ntTSL 3 BASIC22.98■■□□□ 1.27
CSB-PGBD3P0DP91 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC22.98■■□□□ 1.27
CSB-PGBD3P0DP91 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
CSB-PGBD3P0DP91 BSG-214ENST00000614867 960 ntTSL 3 BASIC22.98■■□□□ 1.27
CSB-PGBD3P0DP91 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC22.98■■□□□ 1.27
CSB-PGBD3P0DP91 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC22.98■■□□□ 1.27
CSB-PGBD3P0DP91 AC046185.3-201ENST00000623228 1824 ntBASIC22.98■■□□□ 1.27
CSB-PGBD3P0DP91 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CSB-PGBD3P0DP91 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CSB-PGBD3P0DP91 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
CSB-PGBD3P0DP91 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CSB-PGBD3P0DP91 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
CSB-PGBD3P0DP91 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CSB-PGBD3P0DP91 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CSB-PGBD3P0DP91 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
CSB-PGBD3P0DP91 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CSB-PGBD3P0DP91 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CSB-PGBD3P0DP91 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CSB-PGBD3P0DP91 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CSB-PGBD3P0DP91 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CSB-PGBD3P0DP91 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC22.97■■□□□ 1.27
CSB-PGBD3P0DP91 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC22.97■■□□□ 1.27
CSB-PGBD3P0DP91 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC22.97■■□□□ 1.27
CSB-PGBD3P0DP91 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC22.97■■□□□ 1.27
CSB-PGBD3P0DP91 AC067863.1-201ENST00000494933 530 ntBASIC22.97■■□□□ 1.27
CSB-PGBD3P0DP91 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC22.97■■□□□ 1.27
CSB-PGBD3P0DP91 VPS29-207ENST00000549970 818 ntTSL 3 BASIC22.97■■□□□ 1.27
CSB-PGBD3P0DP91 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC22.97■■□□□ 1.27
CSB-PGBD3P0DP91 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CSB-PGBD3P0DP91 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CSB-PGBD3P0DP91 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
CSB-PGBD3P0DP91 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC22.97■■□□□ 1.27
CSB-PGBD3P0DP91 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CSB-PGBD3P0DP91 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC22.97■■□□□ 1.27
CSB-PGBD3P0DP91 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CSB-PGBD3P0DP91 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC22.97■■□□□ 1.27
CSB-PGBD3P0DP91 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC22.96■■□□□ 1.27
CSB-PGBD3P0DP91 STK4-201ENST00000372801 2038 ntTSL 2 BASIC22.96■■□□□ 1.27
CSB-PGBD3P0DP91 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC22.96■■□□□ 1.27
CSB-PGBD3P0DP91 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CSB-PGBD3P0DP91 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CSB-PGBD3P0DP91 AC087163.2-201ENST00000457299 853 ntBASIC22.96■■□□□ 1.27
CSB-PGBD3P0DP91 RNA5SP421-201ENST00000516864 134 ntBASIC22.96■■□□□ 1.27
CSB-PGBD3P0DP91 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC22.96■■□□□ 1.27
CSB-PGBD3P0DP91 AC099522.2-201ENST00000607001 744 ntBASIC22.96■■□□□ 1.27
CSB-PGBD3P0DP91 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
CSB-PGBD3P0DP91 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC22.96■■□□□ 1.27
CSB-PGBD3P0DP91 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC22.96■■□□□ 1.27
CSB-PGBD3P0DP91 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
CSB-PGBD3P0DP91 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
CSB-PGBD3P0DP91 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CSB-PGBD3P0DP91 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
CSB-PGBD3P0DP91 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
CSB-PGBD3P0DP91 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC22.96■■□□□ 1.27
CSB-PGBD3P0DP91 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CSB-PGBD3P0DP91 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CSB-PGBD3P0DP91 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
CSB-PGBD3P0DP91 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
CSB-PGBD3P0DP91 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CSB-PGBD3P0DP91 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CSB-PGBD3P0DP91 ENSA-206ENST00000361631 725 ntTSL 2 BASIC22.95■■□□□ 1.26
CSB-PGBD3P0DP91 USP49-202ENST00000373010 2446 ntTSL 5 BASIC22.95■■□□□ 1.26
CSB-PGBD3P0DP91 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC22.95■■□□□ 1.26
CSB-PGBD3P0DP91 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC22.95■■□□□ 1.26
CSB-PGBD3P0DP91 PMS2P4-201ENST00000412466 1052 ntBASIC22.95■■□□□ 1.26
CSB-PGBD3P0DP91 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CSB-PGBD3P0DP91 AL592309.1-201ENST00000443127 649 ntBASIC22.95■■□□□ 1.26
CSB-PGBD3P0DP91 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CSB-PGBD3P0DP91 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CSB-PGBD3P0DP91 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC22.95■■□□□ 1.26
CSB-PGBD3P0DP91 FAM86C2P-203ENST00000528684 1004 ntBASIC22.95■■□□□ 1.26
CSB-PGBD3P0DP91 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC22.95■■□□□ 1.26
CSB-PGBD3P0DP91 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC22.95■■□□□ 1.26
CSB-PGBD3P0DP91 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC22.95■■□□□ 1.26
CSB-PGBD3P0DP91 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC22.95■■□□□ 1.26
CSB-PGBD3P0DP91 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC22.95■■□□□ 1.26
CSB-PGBD3P0DP91 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC22.95■■□□□ 1.26
CSB-PGBD3P0DP91 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC22.95■■□□□ 1.26
CSB-PGBD3P0DP91 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC22.95■■□□□ 1.26
CSB-PGBD3P0DP91 HTR7P1-202ENST00000624664 4411 ntBASIC22.95■■□□□ 1.26
CSB-PGBD3P0DP91 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC22.95■■□□□ 1.26
CSB-PGBD3P0DP91 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CSB-PGBD3P0DP91 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CSB-PGBD3P0DP91 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
CSB-PGBD3P0DP91 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CSB-PGBD3P0DP91 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CSB-PGBD3P0DP91 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CSB-PGBD3P0DP91 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CSB-PGBD3P0DP91 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC22.95■■□□□ 1.26
CSB-PGBD3P0DP91 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CSB-PGBD3P0DP91 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CSB-PGBD3P0DP91 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC22.94■■□□□ 1.26
CSB-PGBD3P0DP91 AMT-250ENST00000637682 1823 ntTSL 5 BASIC22.94■■□□□ 1.26
CSB-PGBD3P0DP91 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CSB-PGBD3P0DP91 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC22.94■■□□□ 1.26
CSB-PGBD3P0DP91 AC129492.6-201ENST00000611383 1305 ntBASIC22.94■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms