Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
RAB40ALP0C0E4 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
RAB40ALP0C0E4 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB40ALP0C0E4 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAB40ALP0C0E4 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RAB40ALP0C0E4 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
RAB40ALP0C0E4 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAB40ALP0C0E4 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RAB40ALP0C0E4 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAB40ALP0C0E4 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAB40ALP0C0E4 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RAB40ALP0C0E4 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAB40ALP0C0E4 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
RAB40ALP0C0E4 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
RAB40ALP0C0E4 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAB40ALP0C0E4 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAB40ALP0C0E4 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.44■□□□□ 0.22
RAB40ALP0C0E4 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAB40ALP0C0E4 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
RAB40ALP0C0E4 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.44■□□□□ 0.22
RAB40ALP0C0E4 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAB40ALP0C0E4 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
RAB40ALP0C0E4 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.44■□□□□ 0.22
RAB40ALP0C0E4 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RAB40ALP0C0E4 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.44■□□□□ 0.22
RAB40ALP0C0E4 UPF3AP3-201ENST00000420996 769 ntBASIC16.44■□□□□ 0.22
RAB40ALP0C0E4 AC005104.2-201ENST00000427818 678 ntBASIC16.44■□□□□ 0.22
RAB40ALP0C0E4 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
RAB40ALP0C0E4 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.44■□□□□ 0.22
RAB40ALP0C0E4 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.44■□□□□ 0.22
RAB40ALP0C0E4 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.44■□□□□ 0.22
RAB40ALP0C0E4 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.44■□□□□ 0.22
RAB40ALP0C0E4 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.44■□□□□ 0.22
RAB40ALP0C0E4 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.44■□□□□ 0.22
RAB40ALP0C0E4 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.44■□□□□ 0.22
RAB40ALP0C0E4 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.44■□□□□ 0.22
RAB40ALP0C0E4 AL139424.1-201ENST00000607572 797 ntBASIC16.44■□□□□ 0.22
RAB40ALP0C0E4 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RAB40ALP0C0E4 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAB40ALP0C0E4 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAB40ALP0C0E4 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RAB40ALP0C0E4 AC148477.5-201ENST00000625164 1645 ntBASIC16.44■□□□□ 0.22
RAB40ALP0C0E4 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.44■□□□□ 0.22
RAB40ALP0C0E4 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAB40ALP0C0E4 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAB40ALP0C0E4 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
RAB40ALP0C0E4 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB40ALP0C0E4 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.43■□□□□ 0.22
RAB40ALP0C0E4 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB40ALP0C0E4 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.43■□□□□ 0.22
RAB40ALP0C0E4 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB40ALP0C0E4 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB40ALP0C0E4 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RAB40ALP0C0E4 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB40ALP0C0E4 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.43■□□□□ 0.22
RAB40ALP0C0E4 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
RAB40ALP0C0E4 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB40ALP0C0E4 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RAB40ALP0C0E4 AC009949.1-201ENST00000623048 1830 ntBASIC16.43■□□□□ 0.22
RAB40ALP0C0E4 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.43■□□□□ 0.22
RAB40ALP0C0E4 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB40ALP0C0E4 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB40ALP0C0E4 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RAB40ALP0C0E4 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
RAB40ALP0C0E4 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.43■□□□□ 0.22
RAB40ALP0C0E4 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
RAB40ALP0C0E4 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
RAB40ALP0C0E4 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.43■□□□□ 0.22
RAB40ALP0C0E4 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
RAB40ALP0C0E4 AC004832.2-201ENST00000426397 482 ntBASIC16.43■□□□□ 0.22
RAB40ALP0C0E4 AC007967.2-201ENST00000432613 625 ntBASIC16.43■□□□□ 0.22
RAB40ALP0C0E4 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.43■□□□□ 0.22
RAB40ALP0C0E4 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.43■□□□□ 0.22
RAB40ALP0C0E4 MIR3687-2-201ENST00000577708 61 ntBASIC16.43■□□□□ 0.22
RAB40ALP0C0E4 AC064836.3-201ENST00000607928 673 ntBASIC16.43■□□□□ 0.22
RAB40ALP0C0E4 MIR3687-1-201ENST00000614492 61 ntBASIC16.43■□□□□ 0.22
RAB40ALP0C0E4 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RAB40ALP0C0E4 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB40ALP0C0E4 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RAB40ALP0C0E4 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.43■□□□□ 0.22
RAB40ALP0C0E4 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RAB40ALP0C0E4 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.43■□□□□ 0.22
RAB40ALP0C0E4 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
RAB40ALP0C0E4 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB40ALP0C0E4 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RAB40ALP0C0E4 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.43■□□□□ 0.22
RAB40ALP0C0E4 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAB40ALP0C0E4 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.43■□□□□ 0.22
RAB40ALP0C0E4 AC067852.2-201ENST00000590513 2313 ntBASIC16.42■□□□□ 0.22
RAB40ALP0C0E4 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.42■□□□□ 0.22
RAB40ALP0C0E4 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RAB40ALP0C0E4 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB40ALP0C0E4 AC100803.2-201ENST00000562459 1963 ntBASIC16.42■□□□□ 0.22
RAB40ALP0C0E4 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB40ALP0C0E4 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RAB40ALP0C0E4 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.42■□□□□ 0.22
RAB40ALP0C0E4 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB40ALP0C0E4 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
RAB40ALP0C0E4 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.42■□□□□ 0.22
RAB40ALP0C0E4 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms