Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.08■□□□□ 0.48
CD48P09326 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.08■□□□□ 0.48
CD48P09326 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CD48P09326 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.07■□□□□ 0.48
CD48P09326 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CD48P09326 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.07■□□□□ 0.48
CD48P09326 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD48P09326 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.07■□□□□ 0.48
CD48P09326 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.07■□□□□ 0.48
CD48P09326 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CD48P09326 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD48P09326 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.07■□□□□ 0.48
CD48P09326 AC093525.9-201ENST00000624961 1746 ntBASIC18.07■□□□□ 0.48
CD48P09326 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD48P09326 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD48P09326 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.07■□□□□ 0.48
CD48P09326 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.07■□□□□ 0.48
CD48P09326 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.07■□□□□ 0.48
CD48P09326 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
CD48P09326 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD48P09326 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CD48P09326 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
CD48P09326 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD48P09326 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD48P09326 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD48P09326 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD48P09326 AC092053.1-201ENST00000605787 1936 ntBASIC18.07■□□□□ 0.48
CD48P09326 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.07■□□□□ 0.48
CD48P09326 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.07■□□□□ 0.48
CD48P09326 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.07■□□□□ 0.48
CD48P09326 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
CD48P09326 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
CD48P09326 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.07■□□□□ 0.48
CD48P09326 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD48P09326 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CD48P09326 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD48P09326 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD48P09326 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CD48P09326 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD48P09326 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD48P09326 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CD48P09326 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CD48P09326 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CD48P09326 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.06■□□□□ 0.48
CD48P09326 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CD48P09326 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.06■□□□□ 0.48
CD48P09326 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CD48P09326 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CD48P09326 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
CD48P09326 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CD48P09326 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CD48P09326 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CD48P09326 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CD48P09326 CD9-202ENST00000382515 1229 ntTSL 5 BASIC18.06■□□□□ 0.48
CD48P09326 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.06■□□□□ 0.48
CD48P09326 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.06■□□□□ 0.48
CD48P09326 AC104819.1-201ENST00000504587 486 ntBASIC18.06■□□□□ 0.48
CD48P09326 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.06■□□□□ 0.48
CD48P09326 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.06■□□□□ 0.48
CD48P09326 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.06■□□□□ 0.48
CD48P09326 AC099336.1-202ENST00000602961 463 ntBASIC18.06■□□□□ 0.48
CD48P09326 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.06■□□□□ 0.48
CD48P09326 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CD48P09326 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CD48P09326 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CD48P09326 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.06■□□□□ 0.48
CD48P09326 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CD48P09326 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CD48P09326 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
CD48P09326 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CD48P09326 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CD48P09326 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CD48P09326 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.06■□□□□ 0.48
CD48P09326 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CD48P09326 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.05■□□□□ 0.48
CD48P09326 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CD48P09326 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18.05■□□□□ 0.48
CD48P09326 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CD48P09326 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CD48P09326 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CD48P09326 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CD48P09326 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CD48P09326 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CD48P09326 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CD48P09326 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CD48P09326 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.05■□□□□ 0.48
CD48P09326 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.05■□□□□ 0.48
CD48P09326 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
CD48P09326 AC012615.1-201ENST00000565797 1299 ntBASIC18.05■□□□□ 0.48
CD48P09326 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.05■□□□□ 0.48
CD48P09326 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.05■□□□□ 0.48
CD48P09326 AC114341.1-201ENST00000618070 349 ntBASIC18.05■□□□□ 0.48
CD48P09326 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.05■□□□□ 0.48
CD48P09326 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.05■□□□□ 0.48
CD48P09326 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CD48P09326 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CD48P09326 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CD48P09326 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CD48P09326 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CD48P09326 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms