Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.06■□□□□ 0.16
THBS1P07996 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
THBS1P07996 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.06■□□□□ 0.16
THBS1P07996 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
THBS1P07996 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
THBS1P07996 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
THBS1P07996 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.06■□□□□ 0.16
THBS1P07996 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.06■□□□□ 0.16
THBS1P07996 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.06■□□□□ 0.16
THBS1P07996 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.06■□□□□ 0.16
THBS1P07996 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
THBS1P07996 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
THBS1P07996 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.06■□□□□ 0.16
THBS1P07996 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
THBS1P07996 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
THBS1P07996 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.06■□□□□ 0.16
THBS1P07996 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
THBS1P07996 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.06■□□□□ 0.16
THBS1P07996 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.06■□□□□ 0.16
THBS1P07996 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.06■□□□□ 0.16
THBS1P07996 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.06■□□□□ 0.16
THBS1P07996 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.06■□□□□ 0.16
THBS1P07996 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
THBS1P07996 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
THBS1P07996 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
THBS1P07996 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
THBS1P07996 DRAXINP1-201ENST00000437611 948 ntBASIC16.06■□□□□ 0.16
THBS1P07996 TSSC2-201ENST00000450217 709 ntBASIC16.06■□□□□ 0.16
THBS1P07996 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.06■□□□□ 0.16
THBS1P07996 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
THBS1P07996 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.06■□□□□ 0.16
THBS1P07996 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
THBS1P07996 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
THBS1P07996 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
THBS1P07996 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
THBS1P07996 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.06■□□□□ 0.16
THBS1P07996 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
THBS1P07996 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
THBS1P07996 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
THBS1P07996 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
THBS1P07996 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
THBS1P07996 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.05■□□□□ 0.16
THBS1P07996 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
THBS1P07996 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
THBS1P07996 PCDHA12-202ENST00000613593 2588 ntBASIC16.05■□□□□ 0.16
THBS1P07996 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
THBS1P07996 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
THBS1P07996 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.05■□□□□ 0.16
THBS1P07996 AC233702.3-201ENST00000578656 1387 ntBASIC16.05■□□□□ 0.16
THBS1P07996 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
THBS1P07996 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
THBS1P07996 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
THBS1P07996 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
THBS1P07996 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
THBS1P07996 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
THBS1P07996 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
THBS1P07996 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.05■□□□□ 0.16
THBS1P07996 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.05■□□□□ 0.16
THBS1P07996 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
THBS1P07996 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.05■□□□□ 0.16
THBS1P07996 AC091607.1-201ENST00000490318 1060 ntBASIC16.05■□□□□ 0.16
THBS1P07996 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.05■□□□□ 0.16
THBS1P07996 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.05■□□□□ 0.16
THBS1P07996 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
THBS1P07996 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.05■□□□□ 0.16
THBS1P07996 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
THBS1P07996 AP005901.3-202ENST00000581653 237 ntBASIC16.05■□□□□ 0.16
THBS1P07996 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.05■□□□□ 0.16
THBS1P07996 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.05■□□□□ 0.16
THBS1P07996 Z69720.1-201ENST00000601483 472 ntBASIC16.05■□□□□ 0.16
THBS1P07996 AC069148.1-201ENST00000608741 768 ntBASIC16.05■□□□□ 0.16
THBS1P07996 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
THBS1P07996 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
THBS1P07996 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.05■□□□□ 0.16
THBS1P07996 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
THBS1P07996 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
THBS1P07996 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
THBS1P07996 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
THBS1P07996 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
THBS1P07996 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
THBS1P07996 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
THBS1P07996 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
THBS1P07996 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
THBS1P07996 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
THBS1P07996 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
THBS1P07996 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
THBS1P07996 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
THBS1P07996 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
THBS1P07996 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
THBS1P07996 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
THBS1P07996 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
THBS1P07996 KRT18P1-202ENST00000452408 1331 ntBASIC16.04■□□□□ 0.16
THBS1P07996 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
THBS1P07996 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
THBS1P07996 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
THBS1P07996 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
THBS1P07996 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
THBS1P07996 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
THBS1P07996 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.04■□□□□ 0.16
THBS1P07996 ATP5G2P1-201ENST00000433580 426 ntBASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms