Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CTSBP07858 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CTSBP07858 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTSBP07858 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTSBP07858 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTSBP07858 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTSBP07858 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CTSBP07858 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CTSBP07858 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CTSBP07858 AC005332.8-201ENST00000622750 2735 ntBASIC16.48■□□□□ 0.23
CTSBP07858 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.48■□□□□ 0.23
CTSBP07858 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CTSBP07858 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.48■□□□□ 0.23
CTSBP07858 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.48■□□□□ 0.23
CTSBP07858 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTSBP07858 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTSBP07858 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.48■□□□□ 0.23
CTSBP07858 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.48■□□□□ 0.23
CTSBP07858 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.48■□□□□ 0.23
CTSBP07858 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CTSBP07858 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTSBP07858 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTSBP07858 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.48■□□□□ 0.23
CTSBP07858 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.48■□□□□ 0.23
CTSBP07858 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTSBP07858 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTSBP07858 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CTSBP07858 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTSBP07858 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.48■□□□□ 0.23
CTSBP07858 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTSBP07858 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTSBP07858 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTSBP07858 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTSBP07858 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTSBP07858 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTSBP07858 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CTSBP07858 AL590787.1-201ENST00000568856 1315 ntBASIC16.47■□□□□ 0.23
CTSBP07858 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTSBP07858 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.47■□□□□ 0.23
CTSBP07858 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC16.47■□□□□ 0.23
CTSBP07858 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CTSBP07858 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CTSBP07858 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CTSBP07858 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.47■□□□□ 0.23
CTSBP07858 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.47■□□□□ 0.23
CTSBP07858 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.47■□□□□ 0.23
CTSBP07858 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.47■□□□□ 0.23
CTSBP07858 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.47■□□□□ 0.23
CTSBP07858 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTSBP07858 KRT18P2-201ENST00000447938 1258 ntBASIC16.47■□□□□ 0.23
CTSBP07858 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.47■□□□□ 0.23
CTSBP07858 AC108073.2-201ENST00000464002 357 ntBASIC16.47■□□□□ 0.23
CTSBP07858 PGAM5P1-201ENST00000518923 814 ntBASIC16.47■□□□□ 0.23
CTSBP07858 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.47■□□□□ 0.23
CTSBP07858 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.47■□□□□ 0.23
CTSBP07858 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.47■□□□□ 0.23
CTSBP07858 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.47■□□□□ 0.23
CTSBP07858 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.47■□□□□ 0.23
CTSBP07858 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CTSBP07858 TERC-201ENST00000602385 541 ntBASIC16.47■□□□□ 0.23
CTSBP07858 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.47■□□□□ 0.23
CTSBP07858 AC004790.2-201ENST00000623588 572 ntBASIC16.47■□□□□ 0.23
CTSBP07858 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.47■□□□□ 0.23
CTSBP07858 GNAS-203ENST00000306120 1878 ntBASIC16.47■□□□□ 0.23
CTSBP07858 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CTSBP07858 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTSBP07858 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTSBP07858 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.47■□□□□ 0.23
CTSBP07858 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CTSBP07858 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CTSBP07858 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CTSBP07858 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CTSBP07858 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.46■□□□□ 0.23
CTSBP07858 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.46■□□□□ 0.23
CTSBP07858 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.46■□□□□ 0.23
CTSBP07858 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTSBP07858 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
CTSBP07858 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTSBP07858 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTSBP07858 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTSBP07858 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.46■□□□□ 0.23
CTSBP07858 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTSBP07858 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTSBP07858 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC16.46■□□□□ 0.23
CTSBP07858 MED15P5-201ENST00000423150 992 ntBASIC16.46■□□□□ 0.23
CTSBP07858 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CTSBP07858 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.46■□□□□ 0.23
CTSBP07858 IGHV3-65-201ENST00000523210 341 ntBASIC16.46■□□□□ 0.23
CTSBP07858 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTSBP07858 AC023511.2-201ENST00000618803 211 ntBASIC16.46■□□□□ 0.23
CTSBP07858 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.46■□□□□ 0.23
CTSBP07858 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CTSBP07858 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CTSBP07858 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CTSBP07858 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTSBP07858 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
CTSBP07858 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.46■□□□□ 0.22
CTSBP07858 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
CTSBP07858 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CTSBP07858 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms