Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TPM3P06753 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TPM3P06753 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TPM3P06753 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TPM3P06753 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
TPM3P06753 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TPM3P06753 WT1-209ENST00000530998 2421 ntTSL 2 BASIC19.59■□□□□ 0.73
TPM3P06753 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
TPM3P06753 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC19.59■□□□□ 0.73
TPM3P06753 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TPM3P06753 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.59■□□□□ 0.73
TPM3P06753 FAM201B-201ENST00000458407 597 ntBASIC19.59■□□□□ 0.73
TPM3P06753 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.59■□□□□ 0.73
TPM3P06753 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TPM3P06753 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.59■□□□□ 0.73
TPM3P06753 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
TPM3P06753 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
TPM3P06753 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
TPM3P06753 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
TPM3P06753 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
TPM3P06753 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TPM3P06753 AL513523.2-202ENST00000427283 2040 ntBASIC19.59■□□□□ 0.73
TPM3P06753 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
TPM3P06753 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TPM3P06753 PGR-209ENST00000617858 2816 ntTSL 5 BASIC19.59■□□□□ 0.73
TPM3P06753 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
TPM3P06753 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.59■□□□□ 0.73
TPM3P06753 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.59■□□□□ 0.73
TPM3P06753 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
TPM3P06753 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.73
TPM3P06753 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TPM3P06753 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
TPM3P06753 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TPM3P06753 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TPM3P06753 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
TPM3P06753 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
TPM3P06753 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.72
TPM3P06753 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.58■□□□□ 0.72
TPM3P06753 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.58■□□□□ 0.72
TPM3P06753 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TPM3P06753 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.58■□□□□ 0.72
TPM3P06753 AC010653.2-201ENST00000623505 997 ntBASIC19.58■□□□□ 0.72
TPM3P06753 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TPM3P06753 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.58■□□□□ 0.72
TPM3P06753 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TPM3P06753 AC103702.1-201ENST00000548801 2630 ntBASIC19.58■□□□□ 0.72
TPM3P06753 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TPM3P06753 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.58■□□□□ 0.72
TPM3P06753 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TPM3P06753 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
TPM3P06753 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
TPM3P06753 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TPM3P06753 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
TPM3P06753 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TPM3P06753 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
TPM3P06753 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
TPM3P06753 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC19.57■□□□□ 0.72
TPM3P06753 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
TPM3P06753 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC19.57■□□□□ 0.72
TPM3P06753 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TPM3P06753 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC19.57■□□□□ 0.72
TPM3P06753 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
TPM3P06753 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.57■□□□□ 0.72
TPM3P06753 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TPM3P06753 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TPM3P06753 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
TPM3P06753 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TPM3P06753 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
TPM3P06753 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TPM3P06753 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TPM3P06753 AC007663.1-201ENST00000438948 1240 ntBASIC19.57■□□□□ 0.72
TPM3P06753 UBE2SP1-201ENST00000450587 669 ntBASIC19.57■□□□□ 0.72
TPM3P06753 SEC1P-202ENST00000473944 940 ntBASIC19.57■□□□□ 0.72
TPM3P06753 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.57■□□□□ 0.72
TPM3P06753 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TPM3P06753 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.57■□□□□ 0.72
TPM3P06753 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.57■□□□□ 0.72
TPM3P06753 ITM2C-210ENST00000620962 501 ntBASIC19.57■□□□□ 0.72
TPM3P06753 AC092865.7-201ENST00000641832 219 ntBASIC19.57■□□□□ 0.72
TPM3P06753 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TPM3P06753 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.57■□□□□ 0.72
TPM3P06753 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC19.57■□□□□ 0.72
TPM3P06753 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TPM3P06753 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
TPM3P06753 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TPM3P06753 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TPM3P06753 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TPM3P06753 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TPM3P06753 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
TPM3P06753 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
TPM3P06753 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TPM3P06753 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TPM3P06753 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TPM3P06753 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC19.56■□□□□ 0.72
TPM3P06753 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC19.56■□□□□ 0.72
TPM3P06753 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC19.56■□□□□ 0.72
TPM3P06753 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TPM3P06753 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TPM3P06753 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC19.56■□□□□ 0.72
TPM3P06753 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms