Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
COL4A1P02462 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC21.12■□□□□ 0.97
COL4A1P02462 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
COL4A1P02462 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL4A1P02462 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
COL4A1P02462 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC21.12■□□□□ 0.97
COL4A1P02462 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
COL4A1P02462 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC21.12■□□□□ 0.97
COL4A1P02462 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC21.12■□□□□ 0.97
COL4A1P02462 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL4A1P02462 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
COL4A1P02462 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC21.12■□□□□ 0.97
COL4A1P02462 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
COL4A1P02462 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC21.12■□□□□ 0.97
COL4A1P02462 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
COL4A1P02462 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC21.12■□□□□ 0.97
COL4A1P02462 MIR3197-201ENST00000582241 73 ntBASIC21.12■□□□□ 0.97
COL4A1P02462 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC21.12■□□□□ 0.97
COL4A1P02462 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC21.11■□□□□ 0.97
COL4A1P02462 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
COL4A1P02462 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL4A1P02462 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
COL4A1P02462 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
COL4A1P02462 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC21.11■□□□□ 0.97
COL4A1P02462 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC21.11■□□□□ 0.97
COL4A1P02462 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
COL4A1P02462 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC21.11■□□□□ 0.97
COL4A1P02462 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
COL4A1P02462 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
COL4A1P02462 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC21.11■□□□□ 0.97
COL4A1P02462 Z92544.3-201ENST00000624747 417 ntBASIC21.11■□□□□ 0.97
COL4A1P02462 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL4A1P02462 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC21.1■□□□□ 0.97
COL4A1P02462 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.1■□□□□ 0.97
COL4A1P02462 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL4A1P02462 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL4A1P02462 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC21.1■□□□□ 0.97
COL4A1P02462 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
COL4A1P02462 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
COL4A1P02462 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL4A1P02462 NEK7-201ENST00000367383 586 ntTSL 2 BASIC21.1■□□□□ 0.97
COL4A1P02462 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
COL4A1P02462 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC21.1■□□□□ 0.97
COL4A1P02462 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL4A1P02462 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC21.1■□□□□ 0.97
COL4A1P02462 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
COL4A1P02462 AC004835.2-201ENST00000603762 682 ntBASIC21.1■□□□□ 0.97
COL4A1P02462 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC21.1■□□□□ 0.97
COL4A1P02462 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC21.1■□□□□ 0.97
COL4A1P02462 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
COL4A1P02462 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC21.1■□□□□ 0.97
COL4A1P02462 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL4A1P02462 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
COL4A1P02462 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
COL4A1P02462 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL4A1P02462 AC069335.1-201ENST00000489972 472 ntBASIC21.09■□□□□ 0.97
COL4A1P02462 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC21.09■□□□□ 0.97
COL4A1P02462 AC112191.1-201ENST00000523689 701 ntBASIC21.09■□□□□ 0.97
COL4A1P02462 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC21.09■□□□□ 0.97
COL4A1P02462 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC21.09■□□□□ 0.97
COL4A1P02462 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
COL4A1P02462 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.09■□□□□ 0.97
COL4A1P02462 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL4A1P02462 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC21.09■□□□□ 0.97
COL4A1P02462 SLC22A20-204ENST00000530038 1673 ntBASIC21.09■□□□□ 0.97
COL4A1P02462 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC21.09■□□□□ 0.97
COL4A1P02462 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL4A1P02462 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC21.09■□□□□ 0.97
COL4A1P02462 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL4A1P02462 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
COL4A1P02462 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC21.09■□□□□ 0.97
COL4A1P02462 AC129492.6-201ENST00000611383 1305 ntBASIC21.09■□□□□ 0.97
COL4A1P02462 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COL4A1P02462 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC21.09■□□□□ 0.97
COL4A1P02462 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
COL4A1P02462 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL4A1P02462 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL4A1P02462 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL4A1P02462 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
COL4A1P02462 FAM8A3P-201ENST00000427218 844 ntBASIC21.09■□□□□ 0.97
COL4A1P02462 LHX6-205ENST00000464484 666 ntTSL 2 BASIC21.09■□□□□ 0.97
COL4A1P02462 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
COL4A1P02462 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC21.09■□□□□ 0.97
COL4A1P02462 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC21.09■□□□□ 0.97
COL4A1P02462 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC21.08■□□□□ 0.97
COL4A1P02462 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
COL4A1P02462 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.97
COL4A1P02462 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
COL4A1P02462 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
COL4A1P02462 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
COL4A1P02462 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
COL4A1P02462 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC21.08■□□□□ 0.97
COL4A1P02462 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
COL4A1P02462 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
COL4A1P02462 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
COL4A1P02462 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
COL4A1P02462 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
COL4A1P02462 AC243562.1-201ENST00000560672 389 ntBASIC21.08■□□□□ 0.96
COL4A1P02462 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC21.08■□□□□ 0.96
COL4A1P02462 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC21.08■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms