Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.53■□□□□ 0.08
CNOT4O95628 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.53■□□□□ 0.08
CNOT4O95628 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CNOT4O95628 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.53■□□□□ 0.08
CNOT4O95628 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.53■□□□□ 0.08
CNOT4O95628 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.53■□□□□ 0.08
CNOT4O95628 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CNOT4O95628 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
CNOT4O95628 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CNOT4O95628 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CNOT4O95628 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CNOT4O95628 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.53■□□□□ 0.08
CNOT4O95628 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CNOT4O95628 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CNOT4O95628 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.53■□□□□ 0.08
CNOT4O95628 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CNOT4O95628 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
CNOT4O95628 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.53■□□□□ 0.08
CNOT4O95628 PMS2P1-201ENST00000431037 1228 ntBASIC15.53■□□□□ 0.08
CNOT4O95628 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CNOT4O95628 IGHV3-52-201ENST00000519770 353 ntBASIC15.53■□□□□ 0.08
CNOT4O95628 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
CNOT4O95628 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CNOT4O95628 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CNOT4O95628 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.53■□□□□ 0.08
CNOT4O95628 AC139530.3-201ENST00000620344 690 ntBASIC15.53■□□□□ 0.08
CNOT4O95628 AC073592.4-201ENST00000623827 446 ntBASIC15.53■□□□□ 0.08
CNOT4O95628 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CNOT4O95628 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC15.53■□□□□ 0.08
CNOT4O95628 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CNOT4O95628 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CNOT4O95628 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CNOT4O95628 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CNOT4O95628 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
CNOT4O95628 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CNOT4O95628 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.53■□□□□ 0.08
CNOT4O95628 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC15.53■□□□□ 0.08
CNOT4O95628 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
CNOT4O95628 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CNOT4O95628 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.53■□□□□ 0.08
CNOT4O95628 PC-208ENST00000529047 1607 ntTSL 3 BASIC15.53■□□□□ 0.08
CNOT4O95628 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC15.53■□□□□ 0.08
CNOT4O95628 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CNOT4O95628 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CNOT4O95628 AL049757.1-201ENST00000616842 1596 ntBASIC15.53■□□□□ 0.08
CNOT4O95628 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CNOT4O95628 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CNOT4O95628 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC15.52■□□□□ 0.08
CNOT4O95628 SIGLEC16-201ENST00000599858 1437 ntBASIC15.52■□□□□ 0.08
CNOT4O95628 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.52■□□□□ 0.08
CNOT4O95628 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
CNOT4O95628 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CNOT4O95628 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.52■□□□□ 0.08
CNOT4O95628 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
CNOT4O95628 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CNOT4O95628 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
CNOT4O95628 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.52■□□□□ 0.08
CNOT4O95628 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CNOT4O95628 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC15.52■□□□□ 0.08
CNOT4O95628 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
CNOT4O95628 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
CNOT4O95628 KRT18P13-201ENST00000400056 1290 ntBASIC15.52■□□□□ 0.08
CNOT4O95628 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.52■□□□□ 0.08
CNOT4O95628 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CNOT4O95628 FGFR3P6-201ENST00000457012 610 ntBASIC15.52■□□□□ 0.08
CNOT4O95628 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.52■□□□□ 0.08
CNOT4O95628 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.52■□□□□ 0.08
CNOT4O95628 AP001005.1-201ENST00000571755 1248 ntBASIC15.52■□□□□ 0.08
CNOT4O95628 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.52■□□□□ 0.08
CNOT4O95628 AL671883.3-201ENST00000603274 991 ntBASIC15.52■□□□□ 0.08
CNOT4O95628 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.52■□□□□ 0.08
CNOT4O95628 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.52■□□□□ 0.08
CNOT4O95628 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.52■□□□□ 0.08
CNOT4O95628 AF228730.7-201ENST00000641842 219 ntBASIC15.52■□□□□ 0.08
CNOT4O95628 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
CNOT4O95628 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CNOT4O95628 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC15.52■□□□□ 0.07
CNOT4O95628 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CNOT4O95628 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CNOT4O95628 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.52■□□□□ 0.07
CNOT4O95628 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC15.52■□□□□ 0.07
CNOT4O95628 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CNOT4O95628 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC15.52■□□□□ 0.07
CNOT4O95628 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CNOT4O95628 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
CNOT4O95628 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
CNOT4O95628 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CNOT4O95628 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CNOT4O95628 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CNOT4O95628 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CNOT4O95628 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CNOT4O95628 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CNOT4O95628 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNOT4O95628 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.51■□□□□ 0.07
CNOT4O95628 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.51■□□□□ 0.07
CNOT4O95628 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CNOT4O95628 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CNOT4O95628 AL356309.3-201ENST00000624132 1934 ntBASIC15.51■□□□□ 0.07
CNOT4O95628 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CNOT4O95628 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms