Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VAPBO95292 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.55■□□□□ 0.4
VAPBO95292 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.55■□□□□ 0.4
VAPBO95292 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.55■□□□□ 0.4
VAPBO95292 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.55■□□□□ 0.4
VAPBO95292 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.55■□□□□ 0.4
VAPBO95292 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.55■□□□□ 0.4
VAPBO95292 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.55■□□□□ 0.4
VAPBO95292 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
VAPBO95292 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.55■□□□□ 0.4
VAPBO95292 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
VAPBO95292 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VAPBO95292 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
VAPBO95292 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
VAPBO95292 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.55■□□□□ 0.4
VAPBO95292 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.55■□□□□ 0.4
VAPBO95292 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VAPBO95292 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VAPBO95292 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.54■□□□□ 0.4
VAPBO95292 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.54■□□□□ 0.4
VAPBO95292 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VAPBO95292 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VAPBO95292 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.54■□□□□ 0.4
VAPBO95292 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VAPBO95292 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VAPBO95292 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.54■□□□□ 0.4
VAPBO95292 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
VAPBO95292 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VAPBO95292 KRT18P1-202ENST00000452408 1331 ntBASIC17.54■□□□□ 0.4
VAPBO95292 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VAPBO95292 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VAPBO95292 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VAPBO95292 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VAPBO95292 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VAPBO95292 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.54■□□□□ 0.4
VAPBO95292 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
VAPBO95292 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
VAPBO95292 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VAPBO95292 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
VAPBO95292 MYCLP1-201ENST00000372451 1075 ntBASIC17.54■□□□□ 0.4
VAPBO95292 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.54■□□□□ 0.4
VAPBO95292 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
VAPBO95292 FAM220CP-201ENST00000395253 831 ntBASIC17.54■□□□□ 0.4
VAPBO95292 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.54■□□□□ 0.4
VAPBO95292 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
VAPBO95292 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.54■□□□□ 0.4
VAPBO95292 VENTXP7-201ENST00000475503 772 ntBASIC17.54■□□□□ 0.4
VAPBO95292 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.54■□□□□ 0.4
VAPBO95292 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.54■□□□□ 0.4
VAPBO95292 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.54■□□□□ 0.4
VAPBO95292 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.54■□□□□ 0.4
VAPBO95292 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
VAPBO95292 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VAPBO95292 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VAPBO95292 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.54■□□□□ 0.4
VAPBO95292 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.54■□□□□ 0.4
VAPBO95292 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VAPBO95292 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VAPBO95292 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VAPBO95292 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VAPBO95292 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
VAPBO95292 IER3-202ENST00000376377 1350 ntBASIC17.53■□□□□ 0.4
VAPBO95292 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
VAPBO95292 AL049757.1-201ENST00000616842 1596 ntBASIC17.53■□□□□ 0.4
VAPBO95292 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
VAPBO95292 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
VAPBO95292 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VAPBO95292 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.53■□□□□ 0.4
VAPBO95292 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
VAPBO95292 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VAPBO95292 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VAPBO95292 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.53■□□□□ 0.4
VAPBO95292 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.53■□□□□ 0.4
VAPBO95292 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.53■□□□□ 0.4
VAPBO95292 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.53■□□□□ 0.4
VAPBO95292 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.53■□□□□ 0.4
VAPBO95292 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.53■□□□□ 0.4
VAPBO95292 AP005901.3-202ENST00000581653 237 ntBASIC17.53■□□□□ 0.4
VAPBO95292 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VAPBO95292 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
VAPBO95292 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
VAPBO95292 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
VAPBO95292 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.53■□□□□ 0.4
VAPBO95292 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
VAPBO95292 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
VAPBO95292 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
VAPBO95292 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VAPBO95292 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VAPBO95292 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.53■□□□□ 0.4
VAPBO95292 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.53■□□□□ 0.4
VAPBO95292 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
VAPBO95292 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
VAPBO95292 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
VAPBO95292 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VAPBO95292 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
VAPBO95292 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
VAPBO95292 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
VAPBO95292 AC116353.5-201ENST00000638148 1699 ntBASIC17.52■□□□□ 0.4
VAPBO95292 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
VAPBO95292 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms