Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC22.86■■□□□ 1.25
LTN1O94822 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC22.86■■□□□ 1.25
LTN1O94822 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC22.86■■□□□ 1.25
LTN1O94822 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
LTN1O94822 MIR3909-201ENST00000579518 119 ntBASIC22.86■■□□□ 1.25
LTN1O94822 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
LTN1O94822 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC22.86■■□□□ 1.25
LTN1O94822 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC22.86■■□□□ 1.25
LTN1O94822 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC22.86■■□□□ 1.25
LTN1O94822 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
LTN1O94822 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC22.85■■□□□ 1.25
LTN1O94822 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
LTN1O94822 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
LTN1O94822 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
LTN1O94822 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
LTN1O94822 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC22.85■■□□□ 1.25
LTN1O94822 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
LTN1O94822 PTMS-202ENST00000389462 773 ntTSL 2 BASIC22.85■■□□□ 1.25
LTN1O94822 PMS2P4-201ENST00000412466 1052 ntBASIC22.85■■□□□ 1.25
LTN1O94822 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC22.85■■□□□ 1.25
LTN1O94822 AL592309.1-201ENST00000443127 649 ntBASIC22.85■■□□□ 1.25
LTN1O94822 NMU-203ENST00000507338 658 ntTSL 3 BASIC22.85■■□□□ 1.25
LTN1O94822 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
LTN1O94822 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC22.85■■□□□ 1.25
LTN1O94822 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC22.85■■□□□ 1.25
LTN1O94822 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC22.85■■□□□ 1.25
LTN1O94822 MIR4515-201ENST00000584082 81 ntBASIC22.85■■□□□ 1.25
LTN1O94822 AL031055.1-201ENST00000606362 631 ntBASIC22.85■■□□□ 1.25
LTN1O94822 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
LTN1O94822 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC22.85■■□□□ 1.25
LTN1O94822 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
LTN1O94822 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.85■■□□□ 1.25
LTN1O94822 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
LTN1O94822 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
LTN1O94822 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC22.84■■□□□ 1.25
LTN1O94822 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
LTN1O94822 AL355312.1-201ENST00000407115 2176 ntBASIC22.84■■□□□ 1.25
LTN1O94822 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
LTN1O94822 MIR661-201ENST00000384842 89 ntBASIC22.84■■□□□ 1.25
LTN1O94822 HMGA1P7-201ENST00000406908 502 ntBASIC22.84■■□□□ 1.25
LTN1O94822 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC22.84■■□□□ 1.25
LTN1O94822 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC22.84■■□□□ 1.25
LTN1O94822 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC22.84■■□□□ 1.25
LTN1O94822 AC025678.2-201ENST00000562061 970 ntBASIC22.84■■□□□ 1.25
LTN1O94822 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC22.84■■□□□ 1.25
LTN1O94822 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC22.84■■□□□ 1.25
LTN1O94822 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
LTN1O94822 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC22.84■■□□□ 1.25
LTN1O94822 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
LTN1O94822 SLC22A20-204ENST00000530038 1673 ntBASIC22.84■■□□□ 1.25
LTN1O94822 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
LTN1O94822 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
LTN1O94822 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
LTN1O94822 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
LTN1O94822 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
LTN1O94822 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
LTN1O94822 SPDYE14P-201ENST00000442619 822 ntBASIC22.84■■□□□ 1.25
LTN1O94822 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
LTN1O94822 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC22.84■■□□□ 1.25
LTN1O94822 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
LTN1O94822 AC069262.1-201ENST00000539058 672 ntBASIC22.84■■□□□ 1.25
LTN1O94822 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC22.84■■□□□ 1.25
LTN1O94822 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
LTN1O94822 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.25
LTN1O94822 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC22.83■■□□□ 1.25
LTN1O94822 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC22.83■■□□□ 1.25
LTN1O94822 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
LTN1O94822 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
LTN1O94822 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
LTN1O94822 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.25
LTN1O94822 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
LTN1O94822 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
LTN1O94822 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
LTN1O94822 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
LTN1O94822 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC22.83■■□□□ 1.25
LTN1O94822 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC22.83■■□□□ 1.24
LTN1O94822 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC22.83■■□□□ 1.24
LTN1O94822 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC22.83■■□□□ 1.24
LTN1O94822 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC22.83■■□□□ 1.24
LTN1O94822 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC22.83■■□□□ 1.24
LTN1O94822 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC22.83■■□□□ 1.24
LTN1O94822 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC22.83■■□□□ 1.24
LTN1O94822 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
LTN1O94822 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC22.83■■□□□ 1.24
LTN1O94822 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC22.82■■□□□ 1.24
LTN1O94822 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
LTN1O94822 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC22.82■■□□□ 1.24
LTN1O94822 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC22.82■■□□□ 1.24
LTN1O94822 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
LTN1O94822 RNU1-129P-201ENST00000384064 167 ntBASIC22.82■■□□□ 1.24
LTN1O94822 WRB-204ENST00000398753 699 ntTSL 3 BASIC22.82■■□□□ 1.24
LTN1O94822 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
LTN1O94822 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC22.82■■□□□ 1.24
LTN1O94822 U1.21-201ENST00000580816 167 ntBASIC22.82■■□□□ 1.24
LTN1O94822 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
LTN1O94822 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
LTN1O94822 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
LTN1O94822 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
LTN1O94822 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
LTN1O94822 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms