Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
BEST1O76090 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
BEST1O76090 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
BEST1O76090 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BEST1O76090 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.27■□□□□ 0.52
BEST1O76090 AL138688.1-201ENST00000624851 1594 ntBASIC18.27■□□□□ 0.52
BEST1O76090 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BEST1O76090 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
BEST1O76090 ACTG1P4-201ENST00000425123 1122 ntBASIC18.27■□□□□ 0.52
BEST1O76090 RPL13AP23-201ENST00000480739 586 ntBASIC18.27■□□□□ 0.52
BEST1O76090 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.27■□□□□ 0.52
BEST1O76090 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.27■□□□□ 0.52
BEST1O76090 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.27■□□□□ 0.52
BEST1O76090 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
BEST1O76090 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
BEST1O76090 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
BEST1O76090 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BEST1O76090 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
BEST1O76090 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.27■□□□□ 0.52
BEST1O76090 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
BEST1O76090 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
BEST1O76090 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
BEST1O76090 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
BEST1O76090 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
BEST1O76090 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
BEST1O76090 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
BEST1O76090 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
BEST1O76090 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BEST1O76090 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.26■□□□□ 0.51
BEST1O76090 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
BEST1O76090 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BEST1O76090 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
BEST1O76090 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
BEST1O76090 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.26■□□□□ 0.51
BEST1O76090 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.26■□□□□ 0.51
BEST1O76090 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
BEST1O76090 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.26■□□□□ 0.51
BEST1O76090 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BEST1O76090 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
BEST1O76090 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.26■□□□□ 0.51
BEST1O76090 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
BEST1O76090 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BEST1O76090 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BEST1O76090 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BEST1O76090 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
BEST1O76090 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
BEST1O76090 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
BEST1O76090 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
BEST1O76090 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
BEST1O76090 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.26■□□□□ 0.51
BEST1O76090 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
BEST1O76090 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
BEST1O76090 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.26■□□□□ 0.51
BEST1O76090 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
BEST1O76090 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.25■□□□□ 0.51
BEST1O76090 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BEST1O76090 CROCCP2-202ENST00000412962 2773 ntBASIC18.25■□□□□ 0.51
BEST1O76090 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
BEST1O76090 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
BEST1O76090 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BEST1O76090 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
BEST1O76090 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
BEST1O76090 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
BEST1O76090 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
BEST1O76090 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
BEST1O76090 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
BEST1O76090 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
BEST1O76090 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.25■□□□□ 0.51
BEST1O76090 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC18.25■□□□□ 0.51
BEST1O76090 AC136632.2-201ENST00000512891 861 ntBASIC18.25■□□□□ 0.51
BEST1O76090 RNA5SP415-201ENST00000517246 115 ntBASIC18.25■□□□□ 0.51
BEST1O76090 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.25■□□□□ 0.51
BEST1O76090 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.25■□□□□ 0.51
BEST1O76090 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.25■□□□□ 0.51
BEST1O76090 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.25■□□□□ 0.51
BEST1O76090 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.25■□□□□ 0.51
BEST1O76090 AL671883.3-201ENST00000603274 991 ntBASIC18.25■□□□□ 0.51
BEST1O76090 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BEST1O76090 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC18.25■□□□□ 0.51
BEST1O76090 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
BEST1O76090 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BEST1O76090 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BEST1O76090 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
BEST1O76090 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
BEST1O76090 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.25■□□□□ 0.51
BEST1O76090 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
BEST1O76090 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.25■□□□□ 0.51
BEST1O76090 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
BEST1O76090 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BEST1O76090 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.25■□□□□ 0.51
BEST1O76090 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
BEST1O76090 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
BEST1O76090 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
BEST1O76090 AL590787.1-201ENST00000568856 1315 ntBASIC18.24■□□□□ 0.51
BEST1O76090 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
BEST1O76090 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
BEST1O76090 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.24■□□□□ 0.51
BEST1O76090 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.24■□□□□ 0.51
BEST1O76090 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
BEST1O76090 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms