Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PFDN1O60925 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PFDN1O60925 MFF-208ENST00000409616 1247 ntTSL 5 BASIC15.58■□□□□ 0.08
PFDN1O60925 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC15.58■□□□□ 0.08
PFDN1O60925 DUX4L19-201ENST00000557448 1267 ntBASIC15.58■□□□□ 0.08
PFDN1O60925 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PFDN1O60925 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC15.58■□□□□ 0.08
PFDN1O60925 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PFDN1O60925 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
PFDN1O60925 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PFDN1O60925 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PFDN1O60925 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.58■□□□□ 0.08
PFDN1O60925 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PFDN1O60925 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PFDN1O60925 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
PFDN1O60925 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
PFDN1O60925 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PFDN1O60925 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC15.58■□□□□ 0.08
PFDN1O60925 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
PFDN1O60925 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC15.58■□□□□ 0.08
PFDN1O60925 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC15.58■□□□□ 0.08
PFDN1O60925 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
PFDN1O60925 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.58■□□□□ 0.08
PFDN1O60925 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PFDN1O60925 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PFDN1O60925 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PFDN1O60925 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PFDN1O60925 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.57■□□□□ 0.08
PFDN1O60925 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
PFDN1O60925 AL391807.1-203ENST00000604392 2365 ntBASIC15.57■□□□□ 0.08
PFDN1O60925 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC15.57■□□□□ 0.08
PFDN1O60925 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.57■□□□□ 0.08
PFDN1O60925 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PFDN1O60925 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PFDN1O60925 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PFDN1O60925 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.57■□□□□ 0.08
PFDN1O60925 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PFDN1O60925 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PFDN1O60925 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
PFDN1O60925 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
PFDN1O60925 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
PFDN1O60925 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PFDN1O60925 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC15.57■□□□□ 0.08
PFDN1O60925 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
PFDN1O60925 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PFDN1O60925 AC239859.2-201ENST00000444165 318 ntBASIC15.57■□□□□ 0.08
PFDN1O60925 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PFDN1O60925 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PFDN1O60925 AL356740.2-201ENST00000601559 647 ntBASIC15.57■□□□□ 0.08
PFDN1O60925 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PFDN1O60925 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.57■□□□□ 0.08
PFDN1O60925 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PFDN1O60925 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PFDN1O60925 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
PFDN1O60925 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PFDN1O60925 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
PFDN1O60925 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
PFDN1O60925 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
PFDN1O60925 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PFDN1O60925 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC15.57■□□□□ 0.08
PFDN1O60925 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PFDN1O60925 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
PFDN1O60925 AC078925.2-201ENST00000624013 1973 ntBASIC15.56■□□□□ 0.08
PFDN1O60925 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.56■□□□□ 0.08
PFDN1O60925 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
PFDN1O60925 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.56■□□□□ 0.08
PFDN1O60925 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PFDN1O60925 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC15.56■□□□□ 0.08
PFDN1O60925 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PFDN1O60925 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PFDN1O60925 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
PFDN1O60925 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PFDN1O60925 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PFDN1O60925 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PFDN1O60925 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC15.56■□□□□ 0.08
PFDN1O60925 AC105265.2-201ENST00000467189 838 ntBASIC15.56■□□□□ 0.08
PFDN1O60925 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
PFDN1O60925 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC15.56■□□□□ 0.08
PFDN1O60925 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PFDN1O60925 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC15.56■□□□□ 0.08
PFDN1O60925 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
PFDN1O60925 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.56■□□□□ 0.08
PFDN1O60925 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.56■□□□□ 0.08
PFDN1O60925 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC15.56■□□□□ 0.08
PFDN1O60925 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.56■□□□□ 0.08
PFDN1O60925 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PFDN1O60925 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.56■□□□□ 0.08
PFDN1O60925 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PFDN1O60925 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PFDN1O60925 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.56■□□□□ 0.08
PFDN1O60925 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PFDN1O60925 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PFDN1O60925 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
PFDN1O60925 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
PFDN1O60925 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC15.55■□□□□ 0.08
PFDN1O60925 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PFDN1O60925 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PFDN1O60925 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PFDN1O60925 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
PFDN1O60925 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms