Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
HCN1O60741 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HCN1O60741 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HCN1O60741 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HCN1O60741 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HCN1O60741 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
HCN1O60741 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HCN1O60741 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
HCN1O60741 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
HCN1O60741 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HCN1O60741 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HCN1O60741 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HCN1O60741 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HCN1O60741 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.34■□□□□ 0.21
HCN1O60741 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
HCN1O60741 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HCN1O60741 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HCN1O60741 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HCN1O60741 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HCN1O60741 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
HCN1O60741 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.34■□□□□ 0.21
HCN1O60741 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
HCN1O60741 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HCN1O60741 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HCN1O60741 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
HCN1O60741 AL845331.1-201ENST00000424978 1190 ntBASIC16.34■□□□□ 0.21
HCN1O60741 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.34■□□□□ 0.21
HCN1O60741 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.34■□□□□ 0.21
HCN1O60741 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.34■□□□□ 0.21
HCN1O60741 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.34■□□□□ 0.21
HCN1O60741 AC138894.3-201ENST00000603787 634 ntBASIC16.34■□□□□ 0.21
HCN1O60741 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.34■□□□□ 0.21
HCN1O60741 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HCN1O60741 AC022898.2-201ENST00000616822 1312 ntBASIC16.34■□□□□ 0.21
HCN1O60741 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.34■□□□□ 0.21
HCN1O60741 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.34■□□□□ 0.21
HCN1O60741 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC16.34■□□□□ 0.21
HCN1O60741 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
HCN1O60741 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.34■□□□□ 0.21
HCN1O60741 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
HCN1O60741 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HCN1O60741 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HCN1O60741 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
HCN1O60741 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
HCN1O60741 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HCN1O60741 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.33■□□□□ 0.21
HCN1O60741 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
HCN1O60741 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.33■□□□□ 0.21
HCN1O60741 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
HCN1O60741 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HCN1O60741 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HCN1O60741 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HCN1O60741 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HCN1O60741 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.33■□□□□ 0.2
HCN1O60741 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HCN1O60741 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HCN1O60741 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
HCN1O60741 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HCN1O60741 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.33■□□□□ 0.2
HCN1O60741 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.33■□□□□ 0.2
HCN1O60741 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HCN1O60741 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.33■□□□□ 0.2
HCN1O60741 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.33■□□□□ 0.2
HCN1O60741 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.33■□□□□ 0.2
HCN1O60741 AP005901.3-202ENST00000581653 237 ntBASIC16.33■□□□□ 0.2
HCN1O60741 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.33■□□□□ 0.2
HCN1O60741 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.33■□□□□ 0.2
HCN1O60741 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
HCN1O60741 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
HCN1O60741 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.33■□□□□ 0.2
HCN1O60741 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
HCN1O60741 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
HCN1O60741 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HCN1O60741 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HCN1O60741 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HCN1O60741 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HCN1O60741 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.33■□□□□ 0.2
HCN1O60741 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.33■□□□□ 0.2
HCN1O60741 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.33■□□□□ 0.2
HCN1O60741 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
HCN1O60741 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
HCN1O60741 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HCN1O60741 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
HCN1O60741 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HCN1O60741 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HCN1O60741 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
HCN1O60741 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HCN1O60741 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HCN1O60741 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.33■□□□□ 0.2
HCN1O60741 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.32■□□□□ 0.2
HCN1O60741 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.32■□□□□ 0.2
HCN1O60741 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.32■□□□□ 0.2
HCN1O60741 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
HCN1O60741 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
HCN1O60741 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HCN1O60741 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HCN1O60741 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HCN1O60741 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HCN1O60741 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HCN1O60741 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms