Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZIC3O60481 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ZIC3O60481 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.67■□□□□ 0.1
ZIC3O60481 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZIC3O60481 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ZIC3O60481 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZIC3O60481 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ZIC3O60481 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.67■□□□□ 0.1
ZIC3O60481 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.67■□□□□ 0.1
ZIC3O60481 AC092910.1-201ENST00000482027 1129 ntBASIC15.67■□□□□ 0.1
ZIC3O60481 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC15.67■□□□□ 0.1
ZIC3O60481 IGHV3-22-201ENST00000520721 359 ntBASIC15.67■□□□□ 0.1
ZIC3O60481 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
ZIC3O60481 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.67■□□□□ 0.1
ZIC3O60481 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.67■□□□□ 0.1
ZIC3O60481 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZIC3O60481 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC15.67■□□□□ 0.1
ZIC3O60481 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
ZIC3O60481 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.67■□□□□ 0.1
ZIC3O60481 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
ZIC3O60481 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
ZIC3O60481 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
ZIC3O60481 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ZIC3O60481 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZIC3O60481 HCG11-201ENST00000411553 5696 ntBASIC15.67■□□□□ 0.1
ZIC3O60481 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZIC3O60481 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC15.67■□□□□ 0.1
ZIC3O60481 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
ZIC3O60481 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC15.67■□□□□ 0.1
ZIC3O60481 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZIC3O60481 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ZIC3O60481 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZIC3O60481 BCL2-203ENST00000589955 5011 ntBASIC15.66■□□□□ 0.1
ZIC3O60481 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
ZIC3O60481 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZIC3O60481 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZIC3O60481 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
ZIC3O60481 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZIC3O60481 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ZIC3O60481 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
ZIC3O60481 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZIC3O60481 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ZIC3O60481 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.66■□□□□ 0.1
ZIC3O60481 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC15.66■□□□□ 0.1
ZIC3O60481 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.66■□□□□ 0.1
ZIC3O60481 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC15.66■□□□□ 0.1
ZIC3O60481 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC15.66■□□□□ 0.1
ZIC3O60481 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.66■□□□□ 0.1
ZIC3O60481 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ZIC3O60481 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
ZIC3O60481 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.66■□□□□ 0.1
ZIC3O60481 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.66■□□□□ 0.1
ZIC3O60481 ETFA-208ENST00000559602 792 ntTSL 3 BASIC15.66■□□□□ 0.1
ZIC3O60481 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.66■□□□□ 0.1
ZIC3O60481 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.66■□□□□ 0.1
ZIC3O60481 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZIC3O60481 AL356488.2-201ENST00000602755 427 ntBASIC15.66■□□□□ 0.1
ZIC3O60481 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC15.66■□□□□ 0.1
ZIC3O60481 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.66■□□□□ 0.1
ZIC3O60481 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZIC3O60481 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ZIC3O60481 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZIC3O60481 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
ZIC3O60481 BOC-212ENST00000485230 2173 ntTSL 2 BASIC15.66■□□□□ 0.1
ZIC3O60481 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
ZIC3O60481 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ZIC3O60481 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.65■□□□□ 0.1
ZIC3O60481 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.65■□□□□ 0.1
ZIC3O60481 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZIC3O60481 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZIC3O60481 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.65■□□□□ 0.1
ZIC3O60481 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZIC3O60481 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZIC3O60481 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZIC3O60481 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
ZIC3O60481 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZIC3O60481 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZIC3O60481 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZIC3O60481 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZIC3O60481 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZIC3O60481 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.65■□□□□ 0.1
ZIC3O60481 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.65■□□□□ 0.1
ZIC3O60481 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.65■□□□□ 0.1
ZIC3O60481 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.65■□□□□ 0.1
ZIC3O60481 AC136632.2-201ENST00000512891 861 ntBASIC15.65■□□□□ 0.1
ZIC3O60481 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZIC3O60481 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.65■□□□□ 0.1
ZIC3O60481 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.65■□□□□ 0.1
ZIC3O60481 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC15.65■□□□□ 0.1
ZIC3O60481 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.65■□□□□ 0.1
ZIC3O60481 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
ZIC3O60481 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.65■□□□□ 0.1
ZIC3O60481 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.65■□□□□ 0.1
ZIC3O60481 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.65■□□□□ 0.1
ZIC3O60481 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZIC3O60481 AC016396.2-201ENST00000562575 1417 ntBASIC15.65■□□□□ 0.1
ZIC3O60481 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZIC3O60481 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZIC3O60481 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
ZIC3O60481 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms