Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CXCL13O43927 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CXCL13O43927 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.63■□□□□ 0.09
CXCL13O43927 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CXCL13O43927 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CXCL13O43927 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
CXCL13O43927 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
CXCL13O43927 RPS2P1-201ENST00000434010 821 ntBASIC15.63■□□□□ 0.09
CXCL13O43927 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CXCL13O43927 AC018712.1-201ENST00000455767 687 ntBASIC15.63■□□□□ 0.09
CXCL13O43927 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.63■□□□□ 0.09
CXCL13O43927 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.63■□□□□ 0.09
CXCL13O43927 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.63■□□□□ 0.09
CXCL13O43927 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC15.63■□□□□ 0.09
CXCL13O43927 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CXCL13O43927 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CXCL13O43927 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.63■□□□□ 0.09
CXCL13O43927 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CXCL13O43927 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CXCL13O43927 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.63■□□□□ 0.09
CXCL13O43927 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CXCL13O43927 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CXCL13O43927 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CXCL13O43927 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
CXCL13O43927 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CXCL13O43927 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CXCL13O43927 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CXCL13O43927 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CXCL13O43927 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CXCL13O43927 LYSMD4-203ENST00000378904 2122 ntBASIC15.62■□□□□ 0.09
CXCL13O43927 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
CXCL13O43927 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CXCL13O43927 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CXCL13O43927 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
CXCL13O43927 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CXCL13O43927 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC15.62■□□□□ 0.09
CXCL13O43927 AC046185.3-201ENST00000623228 1824 ntBASIC15.62■□□□□ 0.09
CXCL13O43927 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CXCL13O43927 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.62■□□□□ 0.09
CXCL13O43927 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
CXCL13O43927 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CXCL13O43927 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CXCL13O43927 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.62■□□□□ 0.09
CXCL13O43927 AL031284.1-201ENST00000419297 478 ntBASIC15.62■□□□□ 0.09
CXCL13O43927 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC15.62■□□□□ 0.09
CXCL13O43927 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.62■□□□□ 0.09
CXCL13O43927 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CXCL13O43927 AC079776.4-201ENST00000511039 504 ntBASIC15.62■□□□□ 0.09
CXCL13O43927 OR7E14P-202ENST00000530490 1290 ntBASIC15.62■□□□□ 0.09
CXCL13O43927 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC15.62■□□□□ 0.09
CXCL13O43927 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CXCL13O43927 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.62■□□□□ 0.09
CXCL13O43927 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.62■□□□□ 0.09
CXCL13O43927 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.62■□□□□ 0.09
CXCL13O43927 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.62■□□□□ 0.09
CXCL13O43927 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.62■□□□□ 0.09
CXCL13O43927 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.62■□□□□ 0.09
CXCL13O43927 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
CXCL13O43927 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CXCL13O43927 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.62■□□□□ 0.09
CXCL13O43927 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
CXCL13O43927 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.62■□□□□ 0.09
CXCL13O43927 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.62■□□□□ 0.09
CXCL13O43927 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CXCL13O43927 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
CXCL13O43927 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CXCL13O43927 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CXCL13O43927 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.62■□□□□ 0.09
CXCL13O43927 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.62■□□□□ 0.09
CXCL13O43927 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CXCL13O43927 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.61■□□□□ 0.09
CXCL13O43927 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.61■□□□□ 0.09
CXCL13O43927 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CXCL13O43927 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CXCL13O43927 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CXCL13O43927 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CXCL13O43927 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CXCL13O43927 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
CXCL13O43927 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.61■□□□□ 0.09
CXCL13O43927 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.61■□□□□ 0.09
CXCL13O43927 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
CXCL13O43927 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CXCL13O43927 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.61■□□□□ 0.09
CXCL13O43927 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CXCL13O43927 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.61■□□□□ 0.09
CXCL13O43927 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.61■□□□□ 0.09
CXCL13O43927 HNRNPDP1-201ENST00000439535 754 ntBASIC15.61■□□□□ 0.09
CXCL13O43927 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.61■□□□□ 0.09
CXCL13O43927 PRYP5-201ENST00000451909 266 ntBASIC15.61■□□□□ 0.09
CXCL13O43927 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.61■□□□□ 0.09
CXCL13O43927 AP001005.1-201ENST00000571755 1248 ntBASIC15.61■□□□□ 0.09
CXCL13O43927 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC15.61■□□□□ 0.09
CXCL13O43927 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.61■□□□□ 0.09
CXCL13O43927 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.61■□□□□ 0.09
CXCL13O43927 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CXCL13O43927 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CXCL13O43927 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.61■□□□□ 0.09
CXCL13O43927 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CXCL13O43927 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CXCL13O43927 FST-202ENST00000396947 2538 ntTSL 5 BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms