Protein–RNA interactions for Protein: O43736

ITM2A, Integral membrane protein 2A, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2AO43736 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.13■□□□□ 0.33
ITM2AO43736 AC034232.1-201ENST00000506026 1064 ntBASIC17.13■□□□□ 0.33
ITM2AO43736 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.13■□□□□ 0.33
ITM2AO43736 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ITM2AO43736 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.13■□□□□ 0.33
ITM2AO43736 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.13■□□□□ 0.33
ITM2AO43736 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ITM2AO43736 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.13■□□□□ 0.33
ITM2AO43736 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ITM2AO43736 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
ITM2AO43736 AL023973.1-201ENST00000624619 620 ntBASIC17.13■□□□□ 0.33
ITM2AO43736 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ITM2AO43736 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.13■□□□□ 0.33
ITM2AO43736 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.13■□□□□ 0.33
ITM2AO43736 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ITM2AO43736 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ITM2AO43736 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
ITM2AO43736 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.13■□□□□ 0.33
ITM2AO43736 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.13■□□□□ 0.33
ITM2AO43736 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
ITM2AO43736 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.13■□□□□ 0.33
ITM2AO43736 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITM2AO43736 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.12■□□□□ 0.33
ITM2AO43736 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITM2AO43736 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITM2AO43736 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITM2AO43736 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITM2AO43736 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.12■□□□□ 0.33
ITM2AO43736 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.12■□□□□ 0.33
ITM2AO43736 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ITM2AO43736 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITM2AO43736 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITM2AO43736 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
ITM2AO43736 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITM2AO43736 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ITM2AO43736 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ITM2AO43736 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.12■□□□□ 0.33
ITM2AO43736 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITM2AO43736 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.12■□□□□ 0.33
ITM2AO43736 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.12■□□□□ 0.33
ITM2AO43736 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.12■□□□□ 0.33
ITM2AO43736 MTCL1P1-201ENST00000446207 792 ntBASIC17.12■□□□□ 0.33
ITM2AO43736 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
ITM2AO43736 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.12■□□□□ 0.33
ITM2AO43736 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.12■□□□□ 0.33
ITM2AO43736 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITM2AO43736 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITM2AO43736 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITM2AO43736 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ITM2AO43736 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.12■□□□□ 0.33
ITM2AO43736 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
ITM2AO43736 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITM2AO43736 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
ITM2AO43736 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.12■□□□□ 0.33
ITM2AO43736 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
ITM2AO43736 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITM2AO43736 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.12■□□□□ 0.33
ITM2AO43736 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ITM2AO43736 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
ITM2AO43736 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITM2AO43736 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.12■□□□□ 0.33
ITM2AO43736 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITM2AO43736 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITM2AO43736 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITM2AO43736 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITM2AO43736 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
ITM2AO43736 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
ITM2AO43736 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
ITM2AO43736 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITM2AO43736 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
ITM2AO43736 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITM2AO43736 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITM2AO43736 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.11■□□□□ 0.33
ITM2AO43736 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.11■□□□□ 0.33
ITM2AO43736 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITM2AO43736 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.11■□□□□ 0.33
ITM2AO43736 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ITM2AO43736 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ITM2AO43736 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.11■□□□□ 0.33
ITM2AO43736 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ITM2AO43736 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITM2AO43736 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.11■□□□□ 0.33
ITM2AO43736 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ITM2AO43736 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.11■□□□□ 0.33
ITM2AO43736 AC096633.1-201ENST00000422446 749 ntBASIC17.11■□□□□ 0.33
ITM2AO43736 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.11■□□□□ 0.33
ITM2AO43736 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
ITM2AO43736 AC068472.1-201ENST00000474589 881 ntBASIC17.11■□□□□ 0.33
ITM2AO43736 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ITM2AO43736 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
ITM2AO43736 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
ITM2AO43736 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.11■□□□□ 0.33
ITM2AO43736 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITM2AO43736 AL138966.2-201ENST00000621997 464 ntBASIC17.11■□□□□ 0.33
ITM2AO43736 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.11■□□□□ 0.33
ITM2AO43736 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITM2AO43736 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITM2AO43736 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITM2AO43736 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
ITM2AO43736 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms