Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MSI1O43347 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.11■□□□□ 0.49
MSI1O43347 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
MSI1O43347 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MSI1O43347 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
MSI1O43347 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MSI1O43347 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MSI1O43347 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MSI1O43347 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
MSI1O43347 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
MSI1O43347 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
MSI1O43347 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
MSI1O43347 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MSI1O43347 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MSI1O43347 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MSI1O43347 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
MSI1O43347 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
MSI1O43347 AC097637.2-201ENST00000624096 1997 ntBASIC18.1■□□□□ 0.49
MSI1O43347 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.1■□□□□ 0.49
MSI1O43347 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
MSI1O43347 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.1■□□□□ 0.49
MSI1O43347 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MSI1O43347 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
MSI1O43347 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MSI1O43347 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.1■□□□□ 0.49
MSI1O43347 LAGE3P1-201ENST00000425356 484 ntBASIC18.1■□□□□ 0.49
MSI1O43347 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.1■□□□□ 0.49
MSI1O43347 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.1■□□□□ 0.49
MSI1O43347 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.1■□□□□ 0.49
MSI1O43347 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
MSI1O43347 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.1■□□□□ 0.49
MSI1O43347 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.1■□□□□ 0.49
MSI1O43347 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.1■□□□□ 0.49
MSI1O43347 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.1■□□□□ 0.49
MSI1O43347 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.1■□□□□ 0.49
MSI1O43347 AC008735.5-201ENST00000623544 497 ntBASIC18.1■□□□□ 0.49
MSI1O43347 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MSI1O43347 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
MSI1O43347 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.1■□□□□ 0.49
MSI1O43347 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
MSI1O43347 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MSI1O43347 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
MSI1O43347 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MSI1O43347 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
MSI1O43347 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MSI1O43347 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.09■□□□□ 0.49
MSI1O43347 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
MSI1O43347 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MSI1O43347 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
MSI1O43347 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
MSI1O43347 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MSI1O43347 AP002414.3-201ENST00000589352 1468 ntBASIC18.09■□□□□ 0.49
MSI1O43347 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
MSI1O43347 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MSI1O43347 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MSI1O43347 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MSI1O43347 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.09■□□□□ 0.49
MSI1O43347 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.09■□□□□ 0.49
MSI1O43347 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.09■□□□□ 0.49
MSI1O43347 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.09■□□□□ 0.49
MSI1O43347 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.09■□□□□ 0.49
MSI1O43347 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.09■□□□□ 0.49
MSI1O43347 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
MSI1O43347 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.09■□□□□ 0.49
MSI1O43347 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
MSI1O43347 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.09■□□□□ 0.49
MSI1O43347 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.09■□□□□ 0.49
MSI1O43347 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.09■□□□□ 0.49
MSI1O43347 AC120114.3-201ENST00000611923 658 ntBASIC18.09■□□□□ 0.49
MSI1O43347 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.09■□□□□ 0.49
MSI1O43347 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MSI1O43347 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MSI1O43347 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.09■□□□□ 0.49
MSI1O43347 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MSI1O43347 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.09■□□□□ 0.49
MSI1O43347 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
MSI1O43347 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.09■□□□□ 0.49
MSI1O43347 AL135999.2-201ENST00000622438 1686 ntBASIC18.09■□□□□ 0.49
MSI1O43347 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
MSI1O43347 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
MSI1O43347 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.08■□□□□ 0.49
MSI1O43347 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
MSI1O43347 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
MSI1O43347 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
MSI1O43347 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.08■□□□□ 0.49
MSI1O43347 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
MSI1O43347 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.08■□□□□ 0.49
MSI1O43347 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
MSI1O43347 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.08■□□□□ 0.49
MSI1O43347 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.08■□□□□ 0.49
MSI1O43347 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.08■□□□□ 0.49
MSI1O43347 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.08■□□□□ 0.49
MSI1O43347 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.08■□□□□ 0.49
MSI1O43347 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.08■□□□□ 0.48
MSI1O43347 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
MSI1O43347 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
MSI1O43347 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.08■□□□□ 0.48
MSI1O43347 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
MSI1O43347 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.08■□□□□ 0.48
MSI1O43347 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms