Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
SOX1O00570 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SOX1O00570 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SOX1O00570 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SOX1O00570 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
SOX1O00570 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.39■□□□□ 0.53
SOX1O00570 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.39■□□□□ 0.53
SOX1O00570 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SOX1O00570 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.38■□□□□ 0.53
SOX1O00570 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.38■□□□□ 0.53
SOX1O00570 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SOX1O00570 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SOX1O00570 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SOX1O00570 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC18.38■□□□□ 0.53
SOX1O00570 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
SOX1O00570 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.38■□□□□ 0.53
SOX1O00570 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SOX1O00570 AC087163.2-201ENST00000457299 853 ntBASIC18.38■□□□□ 0.53
SOX1O00570 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC18.38■□□□□ 0.53
SOX1O00570 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC18.38■□□□□ 0.53
SOX1O00570 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.38■□□□□ 0.53
SOX1O00570 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.38■□□□□ 0.53
SOX1O00570 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SOX1O00570 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC18.38■□□□□ 0.53
SOX1O00570 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SOX1O00570 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SOX1O00570 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SOX1O00570 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SOX1O00570 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SOX1O00570 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SOX1O00570 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SOX1O00570 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.38■□□□□ 0.53
SOX1O00570 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.38■□□□□ 0.53
SOX1O00570 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SOX1O00570 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SOX1O00570 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SOX1O00570 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.37■□□□□ 0.53
SOX1O00570 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SOX1O00570 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SOX1O00570 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SOX1O00570 MIR346-201ENST00000362234 95 ntBASIC18.37■□□□□ 0.53
SOX1O00570 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SOX1O00570 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
SOX1O00570 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SOX1O00570 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC18.37■□□□□ 0.53
SOX1O00570 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SOX1O00570 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SOX1O00570 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
SOX1O00570 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.37■□□□□ 0.53
SOX1O00570 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC18.37■□□□□ 0.53
SOX1O00570 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC18.37■□□□□ 0.53
SOX1O00570 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.37■□□□□ 0.53
SOX1O00570 RN7SL190P-201ENST00000582519 257 ntBASIC18.37■□□□□ 0.53
SOX1O00570 AC244093.1-201ENST00000610837 814 ntBASIC18.37■□□□□ 0.53
SOX1O00570 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SOX1O00570 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SOX1O00570 AC020907.1-201ENST00000616460 1350 ntBASIC18.37■□□□□ 0.53
SOX1O00570 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.37■□□□□ 0.53
SOX1O00570 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SOX1O00570 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SOX1O00570 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.37■□□□□ 0.53
SOX1O00570 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SOX1O00570 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.37■□□□□ 0.53
SOX1O00570 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SOX1O00570 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SOX1O00570 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SOX1O00570 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SOX1O00570 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SOX1O00570 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
SOX1O00570 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SOX1O00570 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
SOX1O00570 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SOX1O00570 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SOX1O00570 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SOX1O00570 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.36■□□□□ 0.53
SOX1O00570 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.36■□□□□ 0.53
SOX1O00570 DFFBP1-201ENST00000433250 979 ntBASIC18.36■□□□□ 0.53
SOX1O00570 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC18.36■□□□□ 0.53
SOX1O00570 AC234783.1-201ENST00000441761 496 ntBASIC18.36■□□□□ 0.53
SOX1O00570 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC18.36■□□□□ 0.53
SOX1O00570 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.36■□□□□ 0.53
SOX1O00570 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC18.36■□□□□ 0.53
SOX1O00570 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SOX1O00570 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.36■□□□□ 0.53
SOX1O00570 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.36■□□□□ 0.53
SOX1O00570 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SOX1O00570 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC18.36■□□□□ 0.53
SOX1O00570 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC18.36■□□□□ 0.53
SOX1O00570 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC18.36■□□□□ 0.53
SOX1O00570 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.36■□□□□ 0.53
SOX1O00570 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SOX1O00570 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC18.36■□□□□ 0.53
SOX1O00570 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.36■□□□□ 0.53
SOX1O00570 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SOX1O00570 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SOX1O00570 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.36■□□□□ 0.53
SOX1O00570 AL158211.5-201ENST00000623583 2518 ntBASIC18.36■□□□□ 0.53
SOX1O00570 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SOX1O00570 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SOX1O00570 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms