Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.66■□□□□ 0.26
PDLIM1O00151 SLC25A3P1-201ENST00000443844 931 ntBASIC16.66■□□□□ 0.26
PDLIM1O00151 ECEL1P2-202ENST00000465689 757 ntBASIC16.66■□□□□ 0.26
PDLIM1O00151 AC036111.1-201ENST00000533973 1582 ntBASIC16.66■□□□□ 0.26
PDLIM1O00151 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
PDLIM1O00151 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.66■□□□□ 0.26
PDLIM1O00151 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
PDLIM1O00151 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PDLIM1O00151 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.66■□□□□ 0.26
PDLIM1O00151 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.66■□□□□ 0.26
PDLIM1O00151 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDLIM1O00151 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.66■□□□□ 0.26
PDLIM1O00151 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDLIM1O00151 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PDLIM1O00151 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
PDLIM1O00151 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.66■□□□□ 0.26
PDLIM1O00151 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.66■□□□□ 0.26
PDLIM1O00151 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PDLIM1O00151 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDLIM1O00151 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDLIM1O00151 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDLIM1O00151 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.65■□□□□ 0.26
PDLIM1O00151 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDLIM1O00151 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PDLIM1O00151 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.65■□□□□ 0.26
PDLIM1O00151 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PDLIM1O00151 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.65■□□□□ 0.26
PDLIM1O00151 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDLIM1O00151 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PDLIM1O00151 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDLIM1O00151 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PDLIM1O00151 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.65■□□□□ 0.26
PDLIM1O00151 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDLIM1O00151 AC113347.1-201ENST00000413321 391 ntBASIC16.65■□□□□ 0.26
PDLIM1O00151 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
PDLIM1O00151 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.65■□□□□ 0.26
PDLIM1O00151 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PDLIM1O00151 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.65■□□□□ 0.26
PDLIM1O00151 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.65■□□□□ 0.26
PDLIM1O00151 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDLIM1O00151 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PDLIM1O00151 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PDLIM1O00151 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PDLIM1O00151 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDLIM1O00151 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
PDLIM1O00151 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
PDLIM1O00151 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PDLIM1O00151 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.65■□□□□ 0.26
PDLIM1O00151 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDLIM1O00151 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDLIM1O00151 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
PDLIM1O00151 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
PDLIM1O00151 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.65■□□□□ 0.26
PDLIM1O00151 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PDLIM1O00151 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PDLIM1O00151 AC024909.3-201ENST00000611513 2257 ntBASIC16.65■□□□□ 0.26
PDLIM1O00151 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
PDLIM1O00151 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
PDLIM1O00151 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDLIM1O00151 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.64■□□□□ 0.25
PDLIM1O00151 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDLIM1O00151 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDLIM1O00151 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDLIM1O00151 AC073508.3-201ENST00000619697 1419 ntBASIC16.64■□□□□ 0.25
PDLIM1O00151 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDLIM1O00151 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PDLIM1O00151 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PDLIM1O00151 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDLIM1O00151 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDLIM1O00151 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDLIM1O00151 HMGA1P5-201ENST00000412453 271 ntBASIC16.64■□□□□ 0.25
PDLIM1O00151 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.64■□□□□ 0.25
PDLIM1O00151 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDLIM1O00151 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.64■□□□□ 0.25
PDLIM1O00151 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.64■□□□□ 0.25
PDLIM1O00151 DUTP2-201ENST00000519164 463 ntBASIC16.64■□□□□ 0.25
PDLIM1O00151 AP003041.3-201ENST00000527151 707 ntBASIC16.64■□□□□ 0.25
PDLIM1O00151 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.64■□□□□ 0.25
PDLIM1O00151 AC005363.2-201ENST00000618631 242 ntBASIC16.64■□□□□ 0.25
PDLIM1O00151 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.64■□□□□ 0.25
PDLIM1O00151 AC132938.6-201ENST00000623828 1655 ntBASIC16.64■□□□□ 0.25
PDLIM1O00151 AL024508.2-201ENST00000607749 1894 ntBASIC16.64■□□□□ 0.25
PDLIM1O00151 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.64■□□□□ 0.25
PDLIM1O00151 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
PDLIM1O00151 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDLIM1O00151 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PDLIM1O00151 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDLIM1O00151 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDLIM1O00151 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PDLIM1O00151 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
PDLIM1O00151 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.64■□□□□ 0.25
PDLIM1O00151 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.64■□□□□ 0.25
PDLIM1O00151 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDLIM1O00151 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PDLIM1O00151 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
PDLIM1O00151 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.64■□□□□ 0.25
PDLIM1O00151 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.64■□□□□ 0.25
PDLIM1O00151 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.64■□□□□ 0.25
PDLIM1O00151 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDLIM1O00151 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms