Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 PRKAB2-201ENST00000254101 5417 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 GOLGA4-202ENST00000361924 7772 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 AL031848.2-201ENST00000607670 837 ntBASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 AL356652.1-201ENST00000615962 565 ntBASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 CD38-201ENST00000226279 5668 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 VPS13A-205ENST00000376636 11145 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 FBXO22-201ENST00000308275 10725 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 AC139749.1-202ENST00000617529 3139 ntBASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 AC092171.3-201ENST00000610122 2651 ntBASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 COX18-201ENST00000295890 6846 ntAPPRIS P3 TSL 1 (best) BASIC9.68□□□□□ -0.86
CHKB-CPT1BH3BT56 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 CACNA1C-204ENST00000347598 6655 ntAPPRIS P4 TSL 1 (best) BASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 NIN-202ENST00000324330 4364 ntTSL 5 BASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 PID1-202ENST00000392054 2745 ntTSL 2 BASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 MYC-208ENST00000641036 567 ntBASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 PTPRVP-205ENST00000641549 5067 ntBASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 HEXA-201ENST00000268097 5252 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 SON-201ENST00000300278 7477 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
CHKB-CPT1BH3BT56 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC9.67□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms