Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CFAP99D6REC4 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.43■□□□□ 0.38
CFAP99D6REC4 CROCCP1-201ENST00000426910 5675 ntBASIC17.43■□□□□ 0.38
CFAP99D6REC4 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CFAP99D6REC4 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.43■□□□□ 0.38
CFAP99D6REC4 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CFAP99D6REC4 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.43■□□□□ 0.38
CFAP99D6REC4 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CFAP99D6REC4 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CFAP99D6REC4 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CFAP99D6REC4 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
CFAP99D6REC4 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CFAP99D6REC4 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CFAP99D6REC4 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.43■□□□□ 0.38
CFAP99D6REC4 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.43■□□□□ 0.38
CFAP99D6REC4 AL591684.3-201ENST00000605187 298 ntBASIC17.43■□□□□ 0.38
CFAP99D6REC4 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CFAP99D6REC4 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.43■□□□□ 0.38
CFAP99D6REC4 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CFAP99D6REC4 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CFAP99D6REC4 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CFAP99D6REC4 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.43■□□□□ 0.38
CFAP99D6REC4 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CFAP99D6REC4 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.43■□□□□ 0.38
CFAP99D6REC4 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CFAP99D6REC4 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.43■□□□□ 0.38
CFAP99D6REC4 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CFAP99D6REC4 REXO1L11P-201ENST00000620964 1927 ntBASIC17.43■□□□□ 0.38
CFAP99D6REC4 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CFAP99D6REC4 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CFAP99D6REC4 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CFAP99D6REC4 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CFAP99D6REC4 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.43■□□□□ 0.38
CFAP99D6REC4 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CFAP99D6REC4 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CFAP99D6REC4 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CFAP99D6REC4 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CFAP99D6REC4 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CFAP99D6REC4 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CFAP99D6REC4 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.42■□□□□ 0.38
CFAP99D6REC4 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CFAP99D6REC4 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CFAP99D6REC4 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.42■□□□□ 0.38
CFAP99D6REC4 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
CFAP99D6REC4 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CFAP99D6REC4 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.42■□□□□ 0.38
CFAP99D6REC4 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CFAP99D6REC4 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CFAP99D6REC4 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.42■□□□□ 0.38
CFAP99D6REC4 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CFAP99D6REC4 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CFAP99D6REC4 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CFAP99D6REC4 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CFAP99D6REC4 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CFAP99D6REC4 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CFAP99D6REC4 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CFAP99D6REC4 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CFAP99D6REC4 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.42■□□□□ 0.38
CFAP99D6REC4 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.42■□□□□ 0.38
CFAP99D6REC4 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.42■□□□□ 0.38
CFAP99D6REC4 MIR5100-201ENST00000579544 119 ntBASIC17.42■□□□□ 0.38
CFAP99D6REC4 CLEC4GP1-201ENST00000596555 870 ntBASIC17.42■□□□□ 0.38
CFAP99D6REC4 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CFAP99D6REC4 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CFAP99D6REC4 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CFAP99D6REC4 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
CFAP99D6REC4 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CFAP99D6REC4 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CFAP99D6REC4 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
CFAP99D6REC4 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CFAP99D6REC4 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CFAP99D6REC4 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CFAP99D6REC4 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CFAP99D6REC4 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CFAP99D6REC4 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CFAP99D6REC4 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CFAP99D6REC4 SIRPAP1-201ENST00000448467 1770 ntBASIC17.41■□□□□ 0.38
CFAP99D6REC4 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CFAP99D6REC4 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CFAP99D6REC4 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CFAP99D6REC4 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.41■□□□□ 0.38
CFAP99D6REC4 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CFAP99D6REC4 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CFAP99D6REC4 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.41■□□□□ 0.38
CFAP99D6REC4 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.41■□□□□ 0.38
CFAP99D6REC4 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.41■□□□□ 0.38
CFAP99D6REC4 AC091304.2-201ENST00000564639 760 ntBASIC17.41■□□□□ 0.38
CFAP99D6REC4 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.41■□□□□ 0.38
CFAP99D6REC4 AC109462.3-201ENST00000573934 613 ntBASIC17.41■□□□□ 0.38
CFAP99D6REC4 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.41■□□□□ 0.38
CFAP99D6REC4 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.41■□□□□ 0.38
CFAP99D6REC4 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CFAP99D6REC4 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CFAP99D6REC4 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CFAP99D6REC4 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CFAP99D6REC4 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CFAP99D6REC4 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CFAP99D6REC4 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CFAP99D6REC4 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CFAP99D6REC4 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms