Protein–RNA interactions for Protein: C9JI98

TMEM238, Transmembrane protein 238, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238C9JI98 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
TMEM238C9JI98 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC12.34□□□□□ -0.43
TMEM238C9JI98 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
TMEM238C9JI98 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM238C9JI98 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM238C9JI98 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC12.34□□□□□ -0.43
TMEM238C9JI98 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
TMEM238C9JI98 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC12.34□□□□□ -0.43
TMEM238C9JI98 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
TMEM238C9JI98 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM238C9JI98 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
TMEM238C9JI98 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC12.34□□□□□ -0.43
TMEM238C9JI98 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
TMEM238C9JI98 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC12.33□□□□□ -0.43
TMEM238C9JI98 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC12.33□□□□□ -0.43
TMEM238C9JI98 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC12.33□□□□□ -0.43
TMEM238C9JI98 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
TMEM238C9JI98 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
TMEM238C9JI98 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
TMEM238C9JI98 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM238C9JI98 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC12.33□□□□□ -0.44
TMEM238C9JI98 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC12.33□□□□□ -0.44
TMEM238C9JI98 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM238C9JI98 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM238C9JI98 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC12.33□□□□□ -0.44
TMEM238C9JI98 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM238C9JI98 GSN-203ENST00000373808 2664 ntTSL 2 BASIC12.33□□□□□ -0.44
TMEM238C9JI98 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
TMEM238C9JI98 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM238C9JI98 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM238C9JI98 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM238C9JI98 TUBB8P6-201ENST00000436895 1288 ntBASIC12.33□□□□□ -0.44
TMEM238C9JI98 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM238C9JI98 AL162430.1-201ENST00000480705 870 ntBASIC12.33□□□□□ -0.44
TMEM238C9JI98 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM238C9JI98 ISCU-212ENST00000547005 795 ntTSL 3 BASIC12.33□□□□□ -0.44
TMEM238C9JI98 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM238C9JI98 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM238C9JI98 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM238C9JI98 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC12.33□□□□□ -0.44
TMEM238C9JI98 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM238C9JI98 AC005181.1-201ENST00000604782 1256 ntBASIC12.33□□□□□ -0.44
TMEM238C9JI98 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC12.33□□□□□ -0.44
TMEM238C9JI98 MDK-213ENST00000617138 635 ntTSL 2 BASIC12.33□□□□□ -0.44
TMEM238C9JI98 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
TMEM238C9JI98 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM238C9JI98 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM238C9JI98 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
TMEM238C9JI98 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM238C9JI98 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM238C9JI98 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM238C9JI98 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC12.33□□□□□ -0.44
TMEM238C9JI98 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM238C9JI98 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM238C9JI98 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC12.33□□□□□ -0.44
TMEM238C9JI98 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM238C9JI98 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC12.33□□□□□ -0.44
TMEM238C9JI98 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
TMEM238C9JI98 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM238C9JI98 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM238C9JI98 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC12.33□□□□□ -0.44
TMEM238C9JI98 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM238C9JI98 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM238C9JI98 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM238C9JI98 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM238C9JI98 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
TMEM238C9JI98 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM238C9JI98 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
TMEM238C9JI98 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM238C9JI98 AL357033.4-201ENST00000617703 1807 ntBASIC12.32□□□□□ -0.44
TMEM238C9JI98 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM238C9JI98 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC12.32□□□□□ -0.44
TMEM238C9JI98 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM238C9JI98 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM238C9JI98 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC12.32□□□□□ -0.44
TMEM238C9JI98 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM238C9JI98 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC12.32□□□□□ -0.44
TMEM238C9JI98 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
TMEM238C9JI98 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM238C9JI98 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC12.32□□□□□ -0.44
TMEM238C9JI98 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
TMEM238C9JI98 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM238C9JI98 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC12.32□□□□□ -0.44
TMEM238C9JI98 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC12.32□□□□□ -0.44
TMEM238C9JI98 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM238C9JI98 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC12.32□□□□□ -0.44
TMEM238C9JI98 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM238C9JI98 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM238C9JI98 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
TMEM238C9JI98 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM238C9JI98 LSM12P1-201ENST00000411836 588 ntBASIC12.32□□□□□ -0.44
TMEM238C9JI98 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
TMEM238C9JI98 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM238C9JI98 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC12.32□□□□□ -0.44
TMEM238C9JI98 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM238C9JI98 AC092384.3-202ENST00000564646 2873 ntBASIC12.32□□□□□ -0.44
TMEM238C9JI98 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
TMEM238C9JI98 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
TMEM238C9JI98 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
TMEM238C9JI98 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms