Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 AC008735.5-201ENST00000623544 497 ntBASIC18.17■□□□□ 0.5
YJEFN3A6XGL0 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
YJEFN3A6XGL0 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
YJEFN3A6XGL0 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
YJEFN3A6XGL0 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
YJEFN3A6XGL0 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
YJEFN3A6XGL0 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.17■□□□□ 0.5
YJEFN3A6XGL0 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.17■□□□□ 0.5
YJEFN3A6XGL0 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
YJEFN3A6XGL0 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
YJEFN3A6XGL0 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
YJEFN3A6XGL0 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
YJEFN3A6XGL0 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
YJEFN3A6XGL0 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
YJEFN3A6XGL0 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
YJEFN3A6XGL0 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.16■□□□□ 0.5
YJEFN3A6XGL0 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.16■□□□□ 0.5
YJEFN3A6XGL0 NCF1C-201ENST00000438382 1427 ntBASIC18.16■□□□□ 0.5
YJEFN3A6XGL0 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
YJEFN3A6XGL0 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
YJEFN3A6XGL0 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
YJEFN3A6XGL0 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
YJEFN3A6XGL0 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
YJEFN3A6XGL0 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.16■□□□□ 0.5
YJEFN3A6XGL0 CROCCP2-202ENST00000412962 2773 ntBASIC18.16■□□□□ 0.5
YJEFN3A6XGL0 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.16■□□□□ 0.5
YJEFN3A6XGL0 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
YJEFN3A6XGL0 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
YJEFN3A6XGL0 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.16■□□□□ 0.5
YJEFN3A6XGL0 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
YJEFN3A6XGL0 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.16■□□□□ 0.5
YJEFN3A6XGL0 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
YJEFN3A6XGL0 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.16■□□□□ 0.5
YJEFN3A6XGL0 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.16■□□□□ 0.5
YJEFN3A6XGL0 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.16■□□□□ 0.5
YJEFN3A6XGL0 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.16■□□□□ 0.5
YJEFN3A6XGL0 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.16■□□□□ 0.5
YJEFN3A6XGL0 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
YJEFN3A6XGL0 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
YJEFN3A6XGL0 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.16■□□□□ 0.5
YJEFN3A6XGL0 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
YJEFN3A6XGL0 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
YJEFN3A6XGL0 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
YJEFN3A6XGL0 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
YJEFN3A6XGL0 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.16■□□□□ 0.5
YJEFN3A6XGL0 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
YJEFN3A6XGL0 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
YJEFN3A6XGL0 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
YJEFN3A6XGL0 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
YJEFN3A6XGL0 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
YJEFN3A6XGL0 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.16■□□□□ 0.5
YJEFN3A6XGL0 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.16■□□□□ 0.5
YJEFN3A6XGL0 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
YJEFN3A6XGL0 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
YJEFN3A6XGL0 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
YJEFN3A6XGL0 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
YJEFN3A6XGL0 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
YJEFN3A6XGL0 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
YJEFN3A6XGL0 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
YJEFN3A6XGL0 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
YJEFN3A6XGL0 RPS2P28-201ENST00000314255 741 ntBASIC18.15■□□□□ 0.5
YJEFN3A6XGL0 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
YJEFN3A6XGL0 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
YJEFN3A6XGL0 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
YJEFN3A6XGL0 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.15■□□□□ 0.5
YJEFN3A6XGL0 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.15■□□□□ 0.5
YJEFN3A6XGL0 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.15■□□□□ 0.5
YJEFN3A6XGL0 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.15■□□□□ 0.5
YJEFN3A6XGL0 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.15■□□□□ 0.5
YJEFN3A6XGL0 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.15■□□□□ 0.5
YJEFN3A6XGL0 AC004706.3-202ENST00000621574 984 ntBASIC18.15■□□□□ 0.5
YJEFN3A6XGL0 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.15■□□□□ 0.5
YJEFN3A6XGL0 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
YJEFN3A6XGL0 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
YJEFN3A6XGL0 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
YJEFN3A6XGL0 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
YJEFN3A6XGL0 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
YJEFN3A6XGL0 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
YJEFN3A6XGL0 AC243591.1-201ENST00000452967 1364 ntBASIC18.15■□□□□ 0.5
YJEFN3A6XGL0 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
YJEFN3A6XGL0 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
YJEFN3A6XGL0 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
YJEFN3A6XGL0 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
YJEFN3A6XGL0 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
YJEFN3A6XGL0 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
YJEFN3A6XGL0 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
YJEFN3A6XGL0 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
YJEFN3A6XGL0 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
YJEFN3A6XGL0 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
YJEFN3A6XGL0 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
YJEFN3A6XGL0 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
YJEFN3A6XGL0 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.14■□□□□ 0.49
YJEFN3A6XGL0 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.14■□□□□ 0.49
YJEFN3A6XGL0 ACTG1P4-201ENST00000425123 1122 ntBASIC18.14■□□□□ 0.49
YJEFN3A6XGL0 KRT18P27-201ENST00000427733 1299 ntBASIC18.14■□□□□ 0.49
YJEFN3A6XGL0 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
YJEFN3A6XGL0 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.14■□□□□ 0.49
YJEFN3A6XGL0 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.14■□□□□ 0.49
YJEFN3A6XGL0 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
YJEFN3A6XGL0 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms