Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TBC1D3FA6NER0 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TBC1D3FA6NER0 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TBC1D3FA6NER0 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.36■□□□□ 0.37
TBC1D3FA6NER0 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.36■□□□□ 0.37
TBC1D3FA6NER0 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.36■□□□□ 0.37
TBC1D3FA6NER0 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.36■□□□□ 0.37
TBC1D3FA6NER0 GPR89P-201ENST00000407924 1495 ntBASIC17.36■□□□□ 0.37
TBC1D3FA6NER0 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.36■□□□□ 0.37
TBC1D3FA6NER0 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TBC1D3FA6NER0 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TBC1D3FA6NER0 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TBC1D3FA6NER0 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TBC1D3FA6NER0 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TBC1D3FA6NER0 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.35■□□□□ 0.37
TBC1D3FA6NER0 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TBC1D3FA6NER0 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TBC1D3FA6NER0 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TBC1D3FA6NER0 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.35■□□□□ 0.37
TBC1D3FA6NER0 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TBC1D3FA6NER0 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TBC1D3FA6NER0 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.35■□□□□ 0.37
TBC1D3FA6NER0 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.35■□□□□ 0.37
TBC1D3FA6NER0 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.35■□□□□ 0.37
TBC1D3FA6NER0 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.35■□□□□ 0.37
TBC1D3FA6NER0 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.35■□□□□ 0.37
TBC1D3FA6NER0 AL353135.1-201ENST00000606729 504 ntBASIC17.35■□□□□ 0.37
TBC1D3FA6NER0 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TBC1D3FA6NER0 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.35■□□□□ 0.37
TBC1D3FA6NER0 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TBC1D3FA6NER0 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TBC1D3FA6NER0 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TBC1D3FA6NER0 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TBC1D3FA6NER0 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TBC1D3FA6NER0 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TBC1D3FA6NER0 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TBC1D3FA6NER0 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.35■□□□□ 0.37
TBC1D3FA6NER0 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TBC1D3FA6NER0 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TBC1D3FA6NER0 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.35■□□□□ 0.37
TBC1D3FA6NER0 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TBC1D3FA6NER0 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TBC1D3FA6NER0 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TBC1D3FA6NER0 NEFHP1-201ENST00000412845 2629 ntBASIC17.34■□□□□ 0.37
TBC1D3FA6NER0 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TBC1D3FA6NER0 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.34■□□□□ 0.37
TBC1D3FA6NER0 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.34■□□□□ 0.37
TBC1D3FA6NER0 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TBC1D3FA6NER0 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TBC1D3FA6NER0 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TBC1D3FA6NER0 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TBC1D3FA6NER0 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.34■□□□□ 0.37
TBC1D3FA6NER0 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TBC1D3FA6NER0 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.34■□□□□ 0.37
TBC1D3FA6NER0 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TBC1D3FA6NER0 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TBC1D3FA6NER0 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.34■□□□□ 0.37
TBC1D3FA6NER0 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.34■□□□□ 0.37
TBC1D3FA6NER0 RPS8P6-201ENST00000426177 609 ntBASIC17.34■□□□□ 0.37
TBC1D3FA6NER0 PRSS29P-201ENST00000440800 595 ntBASIC17.34■□□□□ 0.37
TBC1D3FA6NER0 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.34■□□□□ 0.37
TBC1D3FA6NER0 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.34■□□□□ 0.37
TBC1D3FA6NER0 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.34■□□□□ 0.37
TBC1D3FA6NER0 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.34■□□□□ 0.37
TBC1D3FA6NER0 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.34■□□□□ 0.37
TBC1D3FA6NER0 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.34■□□□□ 0.37
TBC1D3FA6NER0 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TBC1D3FA6NER0 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TBC1D3FA6NER0 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.34■□□□□ 0.37
TBC1D3FA6NER0 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TBC1D3FA6NER0 AL805961.1-202ENST00000641562 540 ntBASIC17.34■□□□□ 0.37
TBC1D3FA6NER0 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TBC1D3FA6NER0 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TBC1D3FA6NER0 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
TBC1D3FA6NER0 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
TBC1D3FA6NER0 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TBC1D3FA6NER0 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TBC1D3FA6NER0 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
TBC1D3FA6NER0 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TBC1D3FA6NER0 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.33■□□□□ 0.37
TBC1D3FA6NER0 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
TBC1D3FA6NER0 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.33■□□□□ 0.37
TBC1D3FA6NER0 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TBC1D3FA6NER0 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
TBC1D3FA6NER0 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TBC1D3FA6NER0 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
TBC1D3FA6NER0 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.33■□□□□ 0.37
TBC1D3FA6NER0 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TBC1D3FA6NER0 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TBC1D3FA6NER0 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TBC1D3FA6NER0 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
TBC1D3FA6NER0 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TBC1D3FA6NER0 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
TBC1D3FA6NER0 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
TBC1D3FA6NER0 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
TBC1D3FA6NER0 MRPL20P1-201ENST00000400819 433 ntBASIC17.33■□□□□ 0.36
TBC1D3FA6NER0 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC17.33■□□□□ 0.36
TBC1D3FA6NER0 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.33■□□□□ 0.36
TBC1D3FA6NER0 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.33■□□□□ 0.36
TBC1D3FA6NER0 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms