Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.74■□□□□ 0.43
TCRBV7S3A2A0A539 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.74■□□□□ 0.43
TCRBV7S3A2A0A539 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TCRBV7S3A2A0A539 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TCRBV7S3A2A0A539 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TCRBV7S3A2A0A539 AC092068.3-201ENST00000587894 2016 ntBASIC17.74■□□□□ 0.43
TCRBV7S3A2A0A539 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TCRBV7S3A2A0A539 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TCRBV7S3A2A0A539 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TCRBV7S3A2A0A539 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TCRBV7S3A2A0A539 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
TCRBV7S3A2A0A539 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.73■□□□□ 0.43
TCRBV7S3A2A0A539 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
TCRBV7S3A2A0A539 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TCRBV7S3A2A0A539 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
TCRBV7S3A2A0A539 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TCRBV7S3A2A0A539 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TCRBV7S3A2A0A539 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TCRBV7S3A2A0A539 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.73■□□□□ 0.43
TCRBV7S3A2A0A539 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.73■□□□□ 0.43
TCRBV7S3A2A0A539 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
TCRBV7S3A2A0A539 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
TCRBV7S3A2A0A539 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TCRBV7S3A2A0A539 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TCRBV7S3A2A0A539 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TCRBV7S3A2A0A539 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TCRBV7S3A2A0A539 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.73■□□□□ 0.43
TCRBV7S3A2A0A539 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TCRBV7S3A2A0A539 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.73■□□□□ 0.43
TCRBV7S3A2A0A539 IGHV3-52-201ENST00000519770 353 ntBASIC17.73■□□□□ 0.43
TCRBV7S3A2A0A539 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.73■□□□□ 0.43
TCRBV7S3A2A0A539 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.73■□□□□ 0.43
TCRBV7S3A2A0A539 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.73■□□□□ 0.43
TCRBV7S3A2A0A539 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.73■□□□□ 0.43
TCRBV7S3A2A0A539 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TCRBV7S3A2A0A539 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TCRBV7S3A2A0A539 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TCRBV7S3A2A0A539 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
TCRBV7S3A2A0A539 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TCRBV7S3A2A0A539 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TCRBV7S3A2A0A539 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TCRBV7S3A2A0A539 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TCRBV7S3A2A0A539 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.72■□□□□ 0.43
TCRBV7S3A2A0A539 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.72■□□□□ 0.43
TCRBV7S3A2A0A539 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
TCRBV7S3A2A0A539 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
TCRBV7S3A2A0A539 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TCRBV7S3A2A0A539 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.72■□□□□ 0.43
TCRBV7S3A2A0A539 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
TCRBV7S3A2A0A539 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
TCRBV7S3A2A0A539 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
TCRBV7S3A2A0A539 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TCRBV7S3A2A0A539 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TCRBV7S3A2A0A539 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TCRBV7S3A2A0A539 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
TCRBV7S3A2A0A539 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.72■□□□□ 0.43
TCRBV7S3A2A0A539 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
TCRBV7S3A2A0A539 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TCRBV7S3A2A0A539 TMPOP1-202ENST00000424642 1267 ntBASIC17.72■□□□□ 0.43
TCRBV7S3A2A0A539 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
TCRBV7S3A2A0A539 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.72■□□□□ 0.43
TCRBV7S3A2A0A539 AC122714.2-201ENST00000502787 707 ntBASIC17.72■□□□□ 0.43
TCRBV7S3A2A0A539 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.72■□□□□ 0.43
TCRBV7S3A2A0A539 AL136038.3-201ENST00000561909 1096 ntBASIC17.72■□□□□ 0.43
TCRBV7S3A2A0A539 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.72■□□□□ 0.43
TCRBV7S3A2A0A539 AP005901.3-202ENST00000581653 237 ntBASIC17.72■□□□□ 0.43
TCRBV7S3A2A0A539 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TCRBV7S3A2A0A539 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
TCRBV7S3A2A0A539 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TCRBV7S3A2A0A539 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TCRBV7S3A2A0A539 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TCRBV7S3A2A0A539 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.72■□□□□ 0.43
TCRBV7S3A2A0A539 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.72■□□□□ 0.43
TCRBV7S3A2A0A539 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.72■□□□□ 0.43
TCRBV7S3A2A0A539 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TCRBV7S3A2A0A539 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TCRBV7S3A2A0A539 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TCRBV7S3A2A0A539 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TCRBV7S3A2A0A539 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TCRBV7S3A2A0A539 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TCRBV7S3A2A0A539 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
TCRBV7S3A2A0A539 PCDHB19P-201ENST00000570871 2371 ntBASIC17.71■□□□□ 0.43
TCRBV7S3A2A0A539 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TCRBV7S3A2A0A539 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TCRBV7S3A2A0A539 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TCRBV7S3A2A0A539 MYCLP1-201ENST00000372451 1075 ntBASIC17.71■□□□□ 0.43
TCRBV7S3A2A0A539 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.71■□□□□ 0.43
TCRBV7S3A2A0A539 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.71■□□□□ 0.43
TCRBV7S3A2A0A539 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.71■□□□□ 0.43
TCRBV7S3A2A0A539 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.71■□□□□ 0.43
TCRBV7S3A2A0A539 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.71■□□□□ 0.43
TCRBV7S3A2A0A539 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TCRBV7S3A2A0A539 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.71■□□□□ 0.43
TCRBV7S3A2A0A539 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TCRBV7S3A2A0A539 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.71■□□□□ 0.43
TCRBV7S3A2A0A539 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.71■□□□□ 0.43
TCRBV7S3A2A0A539 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TCRBV7S3A2A0A539 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TCRBV7S3A2A0A539 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TCRBV7S3A2A0A539 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms