Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV5-3A0A0A0MS03 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV5-3A0A0A0MS03 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV5-3A0A0A0MS03 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.33■□□□□ 0.2
TRBV5-3A0A0A0MS03 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TRBV5-3A0A0A0MS03 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV5-3A0A0A0MS03 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.32■□□□□ 0.2
TRBV5-3A0A0A0MS03 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.32■□□□□ 0.2
TRBV5-3A0A0A0MS03 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV5-3A0A0A0MS03 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV5-3A0A0A0MS03 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV5-3A0A0A0MS03 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV5-3A0A0A0MS03 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV5-3A0A0A0MS03 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV5-3A0A0A0MS03 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.32■□□□□ 0.2
TRBV5-3A0A0A0MS03 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV5-3A0A0A0MS03 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.32■□□□□ 0.2
TRBV5-3A0A0A0MS03 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV5-3A0A0A0MS03 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV5-3A0A0A0MS03 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.32■□□□□ 0.2
TRBV5-3A0A0A0MS03 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV5-3A0A0A0MS03 PCDH8P1-201ENST00000428983 2773 ntBASIC16.32■□□□□ 0.2
TRBV5-3A0A0A0MS03 AC103564.2-201ENST00000432853 1299 ntBASIC16.32■□□□□ 0.2
TRBV5-3A0A0A0MS03 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.32■□□□□ 0.2
TRBV5-3A0A0A0MS03 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.32■□□□□ 0.2
TRBV5-3A0A0A0MS03 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.32■□□□□ 0.2
TRBV5-3A0A0A0MS03 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.32■□□□□ 0.2
TRBV5-3A0A0A0MS03 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.32■□□□□ 0.2
TRBV5-3A0A0A0MS03 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.32■□□□□ 0.2
TRBV5-3A0A0A0MS03 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV5-3A0A0A0MS03 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.32■□□□□ 0.2
TRBV5-3A0A0A0MS03 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.32■□□□□ 0.2
TRBV5-3A0A0A0MS03 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TRBV5-3A0A0A0MS03 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV5-3A0A0A0MS03 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.32■□□□□ 0.2
TRBV5-3A0A0A0MS03 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV5-3A0A0A0MS03 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
TRBV5-3A0A0A0MS03 AC133561.5-201ENST00000635547 218 ntBASIC16.32■□□□□ 0.2
TRBV5-3A0A0A0MS03 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.32■□□□□ 0.2
TRBV5-3A0A0A0MS03 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
TRBV5-3A0A0A0MS03 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV5-3A0A0A0MS03 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV5-3A0A0A0MS03 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TRBV5-3A0A0A0MS03 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TRBV5-3A0A0A0MS03 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV5-3A0A0A0MS03 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV5-3A0A0A0MS03 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.31■□□□□ 0.2
TRBV5-3A0A0A0MS03 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV5-3A0A0A0MS03 AL135999.2-201ENST00000622438 1686 ntBASIC16.31■□□□□ 0.2
TRBV5-3A0A0A0MS03 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV5-3A0A0A0MS03 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV5-3A0A0A0MS03 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV5-3A0A0A0MS03 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TRBV5-3A0A0A0MS03 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV5-3A0A0A0MS03 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV5-3A0A0A0MS03 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.31■□□□□ 0.2
TRBV5-3A0A0A0MS03 AC005521.1-201ENST00000393351 872 ntBASIC16.31■□□□□ 0.2
TRBV5-3A0A0A0MS03 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.31■□□□□ 0.2
TRBV5-3A0A0A0MS03 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TRBV5-3A0A0A0MS03 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV5-3A0A0A0MS03 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.31■□□□□ 0.2
TRBV5-3A0A0A0MS03 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV5-3A0A0A0MS03 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV5-3A0A0A0MS03 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV5-3A0A0A0MS03 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TRBV5-3A0A0A0MS03 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.31■□□□□ 0.2
TRBV5-3A0A0A0MS03 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV5-3A0A0A0MS03 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV5-3A0A0A0MS03 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRBV5-3A0A0A0MS03 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TRBV5-3A0A0A0MS03 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.3■□□□□ 0.2
TRBV5-3A0A0A0MS03 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV5-3A0A0A0MS03 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV5-3A0A0A0MS03 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV5-3A0A0A0MS03 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
TRBV5-3A0A0A0MS03 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
TRBV5-3A0A0A0MS03 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
TRBV5-3A0A0A0MS03 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV5-3A0A0A0MS03 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.3■□□□□ 0.2
TRBV5-3A0A0A0MS03 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV5-3A0A0A0MS03 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV5-3A0A0A0MS03 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV5-3A0A0A0MS03 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV5-3A0A0A0MS03 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.3■□□□□ 0.2
TRBV5-3A0A0A0MS03 GUSBP12-201ENST00000513727 720 ntBASIC16.3■□□□□ 0.2
TRBV5-3A0A0A0MS03 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.3■□□□□ 0.2
TRBV5-3A0A0A0MS03 AC111152.3-201ENST00000569699 673 ntBASIC16.3■□□□□ 0.2
TRBV5-3A0A0A0MS03 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV5-3A0A0A0MS03 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV5-3A0A0A0MS03 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV5-3A0A0A0MS03 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.3■□□□□ 0.2
TRBV5-3A0A0A0MS03 AL592071.1-201ENST00000611956 408 ntBASIC16.3■□□□□ 0.2
TRBV5-3A0A0A0MS03 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
TRBV5-3A0A0A0MS03 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV5-3A0A0A0MS03 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV5-3A0A0A0MS03 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
TRBV5-3A0A0A0MS03 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV5-3A0A0A0MS03 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV5-3A0A0A0MS03 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRBV5-3A0A0A0MS03 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms