Protein–RNA interactions for Protein: Q9Y6D6

ARFGEF1, Brefeldin A-inhibited guanine nucleotide-exchange protein 1, humanhuman

Predictions only

Length 1,849 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1Q9Y6D6 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
ARFGEF1Q9Y6D6 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
ARFGEF1Q9Y6D6 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC21.09■□□□□ 0.97
ARFGEF1Q9Y6D6 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC21.09■□□□□ 0.97
ARFGEF1Q9Y6D6 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ARFGEF1Q9Y6D6 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
ARFGEF1Q9Y6D6 AC073592.8-201ENST00000624126 511 ntBASIC21.09■□□□□ 0.97
ARFGEF1Q9Y6D6 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ARFGEF1Q9Y6D6 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ARFGEF1Q9Y6D6 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC21.09■□□□□ 0.97
ARFGEF1Q9Y6D6 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ARFGEF1Q9Y6D6 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
ARFGEF1Q9Y6D6 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC21.08■□□□□ 0.97
ARFGEF1Q9Y6D6 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ARFGEF1Q9Y6D6 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ARFGEF1Q9Y6D6 SATB1-217ENST00000493952 626 ntTSL 3 BASIC21.08■□□□□ 0.97
ARFGEF1Q9Y6D6 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
ARFGEF1Q9Y6D6 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC21.08■□□□□ 0.97
ARFGEF1Q9Y6D6 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
ARFGEF1Q9Y6D6 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC21.08■□□□□ 0.97
ARFGEF1Q9Y6D6 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
ARFGEF1Q9Y6D6 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
ARFGEF1Q9Y6D6 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
ARFGEF1Q9Y6D6 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ARFGEF1Q9Y6D6 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ARFGEF1Q9Y6D6 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC21.08■□□□□ 0.97
ARFGEF1Q9Y6D6 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC21.08■□□□□ 0.97
ARFGEF1Q9Y6D6 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC21.08■□□□□ 0.97
ARFGEF1Q9Y6D6 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
ARFGEF1Q9Y6D6 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
ARFGEF1Q9Y6D6 WASH6P-202ENST00000359512 1437 ntBASIC21.08■□□□□ 0.96
ARFGEF1Q9Y6D6 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
ARFGEF1Q9Y6D6 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC21.08■□□□□ 0.96
ARFGEF1Q9Y6D6 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC21.08■□□□□ 0.96
ARFGEF1Q9Y6D6 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC21.08■□□□□ 0.96
ARFGEF1Q9Y6D6 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ARFGEF1Q9Y6D6 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
ARFGEF1Q9Y6D6 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC21.08■□□□□ 0.96
ARFGEF1Q9Y6D6 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
ARFGEF1Q9Y6D6 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.08■□□□□ 0.96
ARFGEF1Q9Y6D6 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC21.07■□□□□ 0.96
ARFGEF1Q9Y6D6 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ARFGEF1Q9Y6D6 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
ARFGEF1Q9Y6D6 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
ARFGEF1Q9Y6D6 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ARFGEF1Q9Y6D6 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ARFGEF1Q9Y6D6 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC21.07■□□□□ 0.96
ARFGEF1Q9Y6D6 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC21.07■□□□□ 0.96
ARFGEF1Q9Y6D6 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC21.07■□□□□ 0.96
ARFGEF1Q9Y6D6 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC21.07■□□□□ 0.96
ARFGEF1Q9Y6D6 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
ARFGEF1Q9Y6D6 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC21.07■□□□□ 0.96
ARFGEF1Q9Y6D6 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC21.07■□□□□ 0.96
ARFGEF1Q9Y6D6 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
ARFGEF1Q9Y6D6 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ARFGEF1Q9Y6D6 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
ARFGEF1Q9Y6D6 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ARFGEF1Q9Y6D6 AC093677.2-201ENST00000600169 1863 ntBASIC21.07■□□□□ 0.96
ARFGEF1Q9Y6D6 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC21.07■□□□□ 0.96
ARFGEF1Q9Y6D6 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC21.07■□□□□ 0.96
ARFGEF1Q9Y6D6 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
ARFGEF1Q9Y6D6 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ARFGEF1Q9Y6D6 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
ARFGEF1Q9Y6D6 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ARFGEF1Q9Y6D6 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC21.06■□□□□ 0.96
ARFGEF1Q9Y6D6 AC245100.3-201ENST00000441281 285 ntBASIC21.06■□□□□ 0.96
ARFGEF1Q9Y6D6 AL512638.1-201ENST00000457493 794 ntBASIC21.06■□□□□ 0.96
ARFGEF1Q9Y6D6 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ARFGEF1Q9Y6D6 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC21.06■□□□□ 0.96
ARFGEF1Q9Y6D6 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC21.06■□□□□ 0.96
ARFGEF1Q9Y6D6 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ARFGEF1Q9Y6D6 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC21.06■□□□□ 0.96
ARFGEF1Q9Y6D6 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC21.06■□□□□ 0.96
ARFGEF1Q9Y6D6 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
ARFGEF1Q9Y6D6 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ARFGEF1Q9Y6D6 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC21.06■□□□□ 0.96
ARFGEF1Q9Y6D6 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ARFGEF1Q9Y6D6 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC21.06■□□□□ 0.96
ARFGEF1Q9Y6D6 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ARFGEF1Q9Y6D6 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ARFGEF1Q9Y6D6 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ARFGEF1Q9Y6D6 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC21.06■□□□□ 0.96
ARFGEF1Q9Y6D6 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC21.06■□□□□ 0.96
ARFGEF1Q9Y6D6 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ARFGEF1Q9Y6D6 SPTLC1P1-201ENST00000447199 261 ntBASIC21.06■□□□□ 0.96
ARFGEF1Q9Y6D6 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC21.06■□□□□ 0.96
ARFGEF1Q9Y6D6 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC21.06■□□□□ 0.96
ARFGEF1Q9Y6D6 GIMAP3P-201ENST00000495150 836 ntBASIC21.06■□□□□ 0.96
ARFGEF1Q9Y6D6 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC21.06■□□□□ 0.96
ARFGEF1Q9Y6D6 AP000842.3-202ENST00000569238 1080 ntBASIC21.06■□□□□ 0.96
ARFGEF1Q9Y6D6 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
ARFGEF1Q9Y6D6 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC21.06■□□□□ 0.96
ARFGEF1Q9Y6D6 AC017083.2-201ENST00000608069 979 ntBASIC21.06■□□□□ 0.96
ARFGEF1Q9Y6D6 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ARFGEF1Q9Y6D6 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ARFGEF1Q9Y6D6 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
ARFGEF1Q9Y6D6 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ARFGEF1Q9Y6D6 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ARFGEF1Q9Y6D6 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ARFGEF1Q9Y6D6 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms