Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTCH2Q9Y6C5 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTCH2Q9Y6C5 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
PTCH2Q9Y6C5 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTCH2Q9Y6C5 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC19.56■□□□□ 0.72
PTCH2Q9Y6C5 AC092580.3-201ENST00000430932 139 ntBASIC19.56■□□□□ 0.72
PTCH2Q9Y6C5 PPP6R2P1-201ENST00000450880 1275 ntBASIC19.56■□□□□ 0.72
PTCH2Q9Y6C5 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC19.56■□□□□ 0.72
PTCH2Q9Y6C5 INO80E-210ENST00000567705 880 ntTSL 3 BASIC19.56■□□□□ 0.72
PTCH2Q9Y6C5 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.56■□□□□ 0.72
PTCH2Q9Y6C5 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC19.56■□□□□ 0.72
PTCH2Q9Y6C5 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTCH2Q9Y6C5 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
PTCH2Q9Y6C5 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTCH2Q9Y6C5 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PTCH2Q9Y6C5 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PTCH2Q9Y6C5 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.56■□□□□ 0.72
PTCH2Q9Y6C5 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTCH2Q9Y6C5 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTCH2Q9Y6C5 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTCH2Q9Y6C5 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTCH2Q9Y6C5 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
PTCH2Q9Y6C5 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTCH2Q9Y6C5 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC19.55■□□□□ 0.72
PTCH2Q9Y6C5 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
PTCH2Q9Y6C5 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC19.55■□□□□ 0.72
PTCH2Q9Y6C5 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTCH2Q9Y6C5 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PTCH2Q9Y6C5 IGHV3-62-201ENST00000520057 340 ntBASIC19.55■□□□□ 0.72
PTCH2Q9Y6C5 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTCH2Q9Y6C5 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC19.55■□□□□ 0.72
PTCH2Q9Y6C5 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC19.55■□□□□ 0.72
PTCH2Q9Y6C5 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC19.55■□□□□ 0.72
PTCH2Q9Y6C5 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PTCH2Q9Y6C5 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTCH2Q9Y6C5 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTCH2Q9Y6C5 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTCH2Q9Y6C5 UXT-AS1-201ENST00000590504 1525 ntBASIC19.55■□□□□ 0.72
PTCH2Q9Y6C5 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
PTCH2Q9Y6C5 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.55■□□□□ 0.72
PTCH2Q9Y6C5 CROCCP3-202ENST00000420820 1947 ntBASIC19.55■□□□□ 0.72
PTCH2Q9Y6C5 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PTCH2Q9Y6C5 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTCH2Q9Y6C5 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTCH2Q9Y6C5 AP000974.1-201ENST00000623909 2387 ntBASIC19.54■□□□□ 0.72
PTCH2Q9Y6C5 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PTCH2Q9Y6C5 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC19.54■□□□□ 0.72
PTCH2Q9Y6C5 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
PTCH2Q9Y6C5 MRPS18AP1-201ENST00000414458 589 ntBASIC19.54■□□□□ 0.72
PTCH2Q9Y6C5 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19.54■□□□□ 0.72
PTCH2Q9Y6C5 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTCH2Q9Y6C5 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PTCH2Q9Y6C5 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.54■□□□□ 0.72
PTCH2Q9Y6C5 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
PTCH2Q9Y6C5 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.54■□□□□ 0.72
PTCH2Q9Y6C5 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
PTCH2Q9Y6C5 MIR6080-201ENST00000617359 66 ntBASIC19.54■□□□□ 0.72
PTCH2Q9Y6C5 AL645728.2-201ENST00000641974 660 ntBASIC19.54■□□□□ 0.72
PTCH2Q9Y6C5 HARS-201ENST00000307633 1780 ntTSL 2 BASIC19.54■□□□□ 0.72
PTCH2Q9Y6C5 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PTCH2Q9Y6C5 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
PTCH2Q9Y6C5 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTCH2Q9Y6C5 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.54■□□□□ 0.72
PTCH2Q9Y6C5 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PTCH2Q9Y6C5 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.54■□□□□ 0.72
PTCH2Q9Y6C5 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTCH2Q9Y6C5 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC19.53■□□□□ 0.72
PTCH2Q9Y6C5 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
PTCH2Q9Y6C5 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTCH2Q9Y6C5 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTCH2Q9Y6C5 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTCH2Q9Y6C5 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.53■□□□□ 0.72
PTCH2Q9Y6C5 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
PTCH2Q9Y6C5 BX276092.7-203ENST00000637198 1536 ntBASIC19.53■□□□□ 0.72
PTCH2Q9Y6C5 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
PTCH2Q9Y6C5 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
PTCH2Q9Y6C5 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTCH2Q9Y6C5 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTCH2Q9Y6C5 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC19.53■□□□□ 0.72
PTCH2Q9Y6C5 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC19.53■□□□□ 0.72
PTCH2Q9Y6C5 AC004890.2-204ENST00000481968 304 ntBASIC19.53■□□□□ 0.72
PTCH2Q9Y6C5 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC19.53■□□□□ 0.72
PTCH2Q9Y6C5 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PTCH2Q9Y6C5 LINC01225-203ENST00000563550 1244 ntBASIC19.53■□□□□ 0.72
PTCH2Q9Y6C5 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.53■□□□□ 0.72
PTCH2Q9Y6C5 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.53■□□□□ 0.72
PTCH2Q9Y6C5 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.53■□□□□ 0.72
PTCH2Q9Y6C5 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
PTCH2Q9Y6C5 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.53■□□□□ 0.72
PTCH2Q9Y6C5 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTCH2Q9Y6C5 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTCH2Q9Y6C5 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
PTCH2Q9Y6C5 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.53■□□□□ 0.72
PTCH2Q9Y6C5 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTCH2Q9Y6C5 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.53■□□□□ 0.72
PTCH2Q9Y6C5 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PTCH2Q9Y6C5 AC129492.6-201ENST00000611383 1305 ntBASIC19.52■□□□□ 0.72
PTCH2Q9Y6C5 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PTCH2Q9Y6C5 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PTCH2Q9Y6C5 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms