Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHGA9Q9Y5G4 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA9Q9Y5G4 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHGA9Q9Y5G4 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHGA9Q9Y5G4 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.34■□□□□ 0.21
PCDHGA9Q9Y5G4 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA9Q9Y5G4 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHGA9Q9Y5G4 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDHGA9Q9Y5G4 AC134684.3-201ENST00000641758 218 ntBASIC16.34■□□□□ 0.21
PCDHGA9Q9Y5G4 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
PCDHGA9Q9Y5G4 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDHGA9Q9Y5G4 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDHGA9Q9Y5G4 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
PCDHGA9Q9Y5G4 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PCDHGA9Q9Y5G4 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA9Q9Y5G4 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHGA9Q9Y5G4 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
PCDHGA9Q9Y5G4 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA9Q9Y5G4 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDHGA9Q9Y5G4 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA9Q9Y5G4 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA9Q9Y5G4 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHGA9Q9Y5G4 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA9Q9Y5G4 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA9Q9Y5G4 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA9Q9Y5G4 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA9Q9Y5G4 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA9Q9Y5G4 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
PCDHGA9Q9Y5G4 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGA9Q9Y5G4 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGA9Q9Y5G4 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.33■□□□□ 0.21
PCDHGA9Q9Y5G4 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGA9Q9Y5G4 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGA9Q9Y5G4 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
PCDHGA9Q9Y5G4 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
PCDHGA9Q9Y5G4 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA9Q9Y5G4 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
PCDHGA9Q9Y5G4 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
PCDHGA9Q9Y5G4 AC073621.1-201ENST00000392730 636 ntBASIC16.33■□□□□ 0.2
PCDHGA9Q9Y5G4 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.33■□□□□ 0.2
PCDHGA9Q9Y5G4 RPS8P6-201ENST00000426177 609 ntBASIC16.33■□□□□ 0.2
PCDHGA9Q9Y5G4 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.33■□□□□ 0.2
PCDHGA9Q9Y5G4 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDHGA9Q9Y5G4 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
PCDHGA9Q9Y5G4 AL355385.1-201ENST00000606123 409 ntBASIC16.33■□□□□ 0.2
PCDHGA9Q9Y5G4 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDHGA9Q9Y5G4 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA9Q9Y5G4 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA9Q9Y5G4 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
PCDHGA9Q9Y5G4 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA9Q9Y5G4 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA9Q9Y5G4 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA9Q9Y5G4 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
PCDHGA9Q9Y5G4 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA9Q9Y5G4 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
PCDHGA9Q9Y5G4 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA9Q9Y5G4 GNAS-203ENST00000306120 1878 ntBASIC16.33■□□□□ 0.2
PCDHGA9Q9Y5G4 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA9Q9Y5G4 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
PCDHGA9Q9Y5G4 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA9Q9Y5G4 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDHGA9Q9Y5G4 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA9Q9Y5G4 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
PCDHGA9Q9Y5G4 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.32■□□□□ 0.2
PCDHGA9Q9Y5G4 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA9Q9Y5G4 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA9Q9Y5G4 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA9Q9Y5G4 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA9Q9Y5G4 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA9Q9Y5G4 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA9Q9Y5G4 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PCDHGA9Q9Y5G4 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PCDHGA9Q9Y5G4 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PCDHGA9Q9Y5G4 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA9Q9Y5G4 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PCDHGA9Q9Y5G4 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA9Q9Y5G4 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA9Q9Y5G4 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA9Q9Y5G4 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA9Q9Y5G4 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA9Q9Y5G4 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA9Q9Y5G4 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA9Q9Y5G4 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDHGA9Q9Y5G4 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDHGA9Q9Y5G4 SPDYE21P-201ENST00000413323 827 ntBASIC16.32■□□□□ 0.2
PCDHGA9Q9Y5G4 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDHGA9Q9Y5G4 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA9Q9Y5G4 HMGN1P19-201ENST00000436976 333 ntBASIC16.32■□□□□ 0.2
PCDHGA9Q9Y5G4 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDHGA9Q9Y5G4 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDHGA9Q9Y5G4 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.32■□□□□ 0.2
PCDHGA9Q9Y5G4 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDHGA9Q9Y5G4 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDHGA9Q9Y5G4 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.32■□□□□ 0.2
PCDHGA9Q9Y5G4 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDHGA9Q9Y5G4 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.32■□□□□ 0.2
PCDHGA9Q9Y5G4 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PCDHGA9Q9Y5G4 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.32■□□□□ 0.2
PCDHGA9Q9Y5G4 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.32■□□□□ 0.2
PCDHGA9Q9Y5G4 AC064836.3-201ENST00000607928 673 ntBASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms