Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDHGB1Q9Y5G3 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB1Q9Y5G3 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB1Q9Y5G3 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDHGB1Q9Y5G3 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB1Q9Y5G3 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PCDHGB1Q9Y5G3 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB1Q9Y5G3 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
PCDHGB1Q9Y5G3 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHGB1Q9Y5G3 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB1Q9Y5G3 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB1Q9Y5G3 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDHGB1Q9Y5G3 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHGB1Q9Y5G3 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDHGB1Q9Y5G3 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB1Q9Y5G3 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB1Q9Y5G3 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PCDHGB1Q9Y5G3 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB1Q9Y5G3 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB1Q9Y5G3 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHGB1Q9Y5G3 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB1Q9Y5G3 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB1Q9Y5G3 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB1Q9Y5G3 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB1Q9Y5G3 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB1Q9Y5G3 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB1Q9Y5G3 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.04■□□□□ 0.16
PCDHGB1Q9Y5G3 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB1Q9Y5G3 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.04■□□□□ 0.16
PCDHGB1Q9Y5G3 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.04■□□□□ 0.16
PCDHGB1Q9Y5G3 NUDT16P1-203ENST00000513809 620 ntBASIC16.04■□□□□ 0.16
PCDHGB1Q9Y5G3 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDHGB1Q9Y5G3 AC112497.1-201ENST00000624824 639 ntBASIC16.04■□□□□ 0.16
PCDHGB1Q9Y5G3 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDHGB1Q9Y5G3 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB1Q9Y5G3 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
PCDHGB1Q9Y5G3 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB1Q9Y5G3 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PCDHGB1Q9Y5G3 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHGB1Q9Y5G3 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDHGB1Q9Y5G3 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB1Q9Y5G3 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB1Q9Y5G3 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB1Q9Y5G3 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB1Q9Y5G3 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB1Q9Y5G3 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
PCDHGB1Q9Y5G3 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB1Q9Y5G3 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB1Q9Y5G3 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB1Q9Y5G3 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PCDHGB1Q9Y5G3 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHGB1Q9Y5G3 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHGB1Q9Y5G3 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGB1Q9Y5G3 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGB1Q9Y5G3 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PCDHGB1Q9Y5G3 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGB1Q9Y5G3 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
PCDHGB1Q9Y5G3 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDHGB1Q9Y5G3 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
PCDHGB1Q9Y5G3 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGB1Q9Y5G3 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGB1Q9Y5G3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGB1Q9Y5G3 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGB1Q9Y5G3 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGB1Q9Y5G3 TSPY17P-201ENST00000450329 467 ntBASIC16.03■□□□□ 0.16
PCDHGB1Q9Y5G3 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.03■□□□□ 0.16
PCDHGB1Q9Y5G3 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGB1Q9Y5G3 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGB1Q9Y5G3 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGB1Q9Y5G3 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.03■□□□□ 0.16
PCDHGB1Q9Y5G3 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGB1Q9Y5G3 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.03■□□□□ 0.16
PCDHGB1Q9Y5G3 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHGB1Q9Y5G3 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PCDHGB1Q9Y5G3 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
PCDHGB1Q9Y5G3 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGB1Q9Y5G3 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGB1Q9Y5G3 AC008741.2-201ENST00000612792 3115 ntBASIC16.02■□□□□ 0.16
PCDHGB1Q9Y5G3 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGB1Q9Y5G3 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC16.02■□□□□ 0.16
PCDHGB1Q9Y5G3 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGB1Q9Y5G3 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGB1Q9Y5G3 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDHGB1Q9Y5G3 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGB1Q9Y5G3 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGB1Q9Y5G3 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGB1Q9Y5G3 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGB1Q9Y5G3 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGB1Q9Y5G3 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGB1Q9Y5G3 CRYGFP-201ENST00000418459 633 ntBASIC16.02■□□□□ 0.16
PCDHGB1Q9Y5G3 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.02■□□□□ 0.16
PCDHGB1Q9Y5G3 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.02■□□□□ 0.16
PCDHGB1Q9Y5G3 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGB1Q9Y5G3 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGB1Q9Y5G3 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDHGB1Q9Y5G3 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDHGB1Q9Y5G3 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDHGB1Q9Y5G3 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.02■□□□□ 0.16
PCDHGB1Q9Y5G3 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCDHGB1Q9Y5G3 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms