Protein–RNA interactions for Protein: Q9Y256

RCE1, CAAX prenyl protease 2, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCE1Q9Y256 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
RCE1Q9Y256 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RCE1Q9Y256 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RCE1Q9Y256 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
RCE1Q9Y256 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RCE1Q9Y256 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RCE1Q9Y256 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
RCE1Q9Y256 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RCE1Q9Y256 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RCE1Q9Y256 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RCE1Q9Y256 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RCE1Q9Y256 PPIH-202ENST00000372549 327 ntTSL 3 BASIC15.81■□□□□ 0.12
RCE1Q9Y256 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
RCE1Q9Y256 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RCE1Q9Y256 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RCE1Q9Y256 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RCE1Q9Y256 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC15.81■□□□□ 0.12
RCE1Q9Y256 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.81■□□□□ 0.12
RCE1Q9Y256 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RCE1Q9Y256 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RCE1Q9Y256 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC15.81■□□□□ 0.12
RCE1Q9Y256 TPSP2-201ENST00000561760 610 ntBASIC15.81■□□□□ 0.12
RCE1Q9Y256 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC15.81■□□□□ 0.12
RCE1Q9Y256 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RCE1Q9Y256 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.81■□□□□ 0.12
RCE1Q9Y256 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.81■□□□□ 0.12
RCE1Q9Y256 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
RCE1Q9Y256 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.81■□□□□ 0.12
RCE1Q9Y256 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.81■□□□□ 0.12
RCE1Q9Y256 AP002414.4-201ENST00000589764 1148 ntBASIC15.81■□□□□ 0.12
RCE1Q9Y256 Z69720.1-201ENST00000601483 472 ntBASIC15.81■□□□□ 0.12
RCE1Q9Y256 NPAP1P7-201ENST00000613027 823 ntBASIC15.81■□□□□ 0.12
RCE1Q9Y256 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RCE1Q9Y256 CROCCP1-201ENST00000426910 5675 ntBASIC15.81■□□□□ 0.12
RCE1Q9Y256 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RCE1Q9Y256 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC15.81■□□□□ 0.12
RCE1Q9Y256 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RCE1Q9Y256 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
RCE1Q9Y256 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RCE1Q9Y256 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RCE1Q9Y256 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RCE1Q9Y256 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RCE1Q9Y256 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RCE1Q9Y256 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RCE1Q9Y256 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RCE1Q9Y256 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
RCE1Q9Y256 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RCE1Q9Y256 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RCE1Q9Y256 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.8■□□□□ 0.12
RCE1Q9Y256 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RCE1Q9Y256 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RCE1Q9Y256 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC15.8■□□□□ 0.12
RCE1Q9Y256 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.8■□□□□ 0.12
RCE1Q9Y256 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RCE1Q9Y256 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
RCE1Q9Y256 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RCE1Q9Y256 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
RCE1Q9Y256 UPK3BP1-201ENST00000428678 509 ntBASIC15.8■□□□□ 0.12
RCE1Q9Y256 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.8■□□□□ 0.12
RCE1Q9Y256 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.8■□□□□ 0.12
RCE1Q9Y256 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RCE1Q9Y256 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC15.8■□□□□ 0.12
RCE1Q9Y256 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC15.8■□□□□ 0.12
RCE1Q9Y256 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RCE1Q9Y256 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.8■□□□□ 0.12
RCE1Q9Y256 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC15.8■□□□□ 0.12
RCE1Q9Y256 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RCE1Q9Y256 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RCE1Q9Y256 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.8■□□□□ 0.12
RCE1Q9Y256 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RCE1Q9Y256 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RCE1Q9Y256 AC009949.1-201ENST00000623048 1830 ntBASIC15.8■□□□□ 0.12
RCE1Q9Y256 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RCE1Q9Y256 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RCE1Q9Y256 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RCE1Q9Y256 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RCE1Q9Y256 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.79■□□□□ 0.12
RCE1Q9Y256 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
RCE1Q9Y256 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RCE1Q9Y256 BX276092.7-203ENST00000637198 1536 ntBASIC15.79■□□□□ 0.12
RCE1Q9Y256 AL139384.1-201ENST00000612143 3047 ntBASIC15.79■□□□□ 0.12
RCE1Q9Y256 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RCE1Q9Y256 AC125634.1-201ENST00000438758 1403 ntBASIC15.79■□□□□ 0.12
RCE1Q9Y256 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
RCE1Q9Y256 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RCE1Q9Y256 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RCE1Q9Y256 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.79■□□□□ 0.12
RCE1Q9Y256 AC233702.3-201ENST00000578656 1387 ntBASIC15.79■□□□□ 0.12
RCE1Q9Y256 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.79■□□□□ 0.12
RCE1Q9Y256 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RCE1Q9Y256 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
RCE1Q9Y256 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
RCE1Q9Y256 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RCE1Q9Y256 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RCE1Q9Y256 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.79■□□□□ 0.12
RCE1Q9Y256 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.79■□□□□ 0.12
RCE1Q9Y256 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC15.79■□□□□ 0.12
RCE1Q9Y256 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.79■□□□□ 0.12
RCE1Q9Y256 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RCE1Q9Y256 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms