Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AC093010.1-201ENST00000473625 1624 ntBASIC21■□□□□ 0.95
ZC3H4Q9UPT8 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC21■□□□□ 0.95
ZC3H4Q9UPT8 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
ZC3H4Q9UPT8 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC21■□□□□ 0.95
ZC3H4Q9UPT8 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC21■□□□□ 0.95
ZC3H4Q9UPT8 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZC3H4Q9UPT8 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC21■□□□□ 0.95
ZC3H4Q9UPT8 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC21■□□□□ 0.95
ZC3H4Q9UPT8 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC21■□□□□ 0.95
ZC3H4Q9UPT8 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZC3H4Q9UPT8 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC21■□□□□ 0.95
ZC3H4Q9UPT8 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
ZC3H4Q9UPT8 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
ZC3H4Q9UPT8 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
ZC3H4Q9UPT8 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZC3H4Q9UPT8 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC21■□□□□ 0.95
ZC3H4Q9UPT8 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC21■□□□□ 0.95
ZC3H4Q9UPT8 AC004890.2-204ENST00000481968 304 ntBASIC21■□□□□ 0.95
ZC3H4Q9UPT8 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC21■□□□□ 0.95
ZC3H4Q9UPT8 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC21■□□□□ 0.95
ZC3H4Q9UPT8 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
ZC3H4Q9UPT8 TMED1-207ENST00000591695 809 ntTSL 5 BASIC21■□□□□ 0.95
ZC3H4Q9UPT8 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21■□□□□ 0.95
ZC3H4Q9UPT8 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC21■□□□□ 0.95
ZC3H4Q9UPT8 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZC3H4Q9UPT8 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC21■□□□□ 0.95
ZC3H4Q9UPT8 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
ZC3H4Q9UPT8 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZC3H4Q9UPT8 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
ZC3H4Q9UPT8 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
ZC3H4Q9UPT8 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZC3H4Q9UPT8 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZC3H4Q9UPT8 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.99■□□□□ 0.95
ZC3H4Q9UPT8 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZC3H4Q9UPT8 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC20.99■□□□□ 0.95
ZC3H4Q9UPT8 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZC3H4Q9UPT8 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC20.99■□□□□ 0.95
ZC3H4Q9UPT8 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.99■□□□□ 0.95
ZC3H4Q9UPT8 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ZC3H4Q9UPT8 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ZC3H4Q9UPT8 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
ZC3H4Q9UPT8 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.99■□□□□ 0.95
ZC3H4Q9UPT8 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZC3H4Q9UPT8 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZC3H4Q9UPT8 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZC3H4Q9UPT8 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZC3H4Q9UPT8 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZC3H4Q9UPT8 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
ZC3H4Q9UPT8 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ZC3H4Q9UPT8 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZC3H4Q9UPT8 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.99■□□□□ 0.95
ZC3H4Q9UPT8 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC20.99■□□□□ 0.95
ZC3H4Q9UPT8 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
ZC3H4Q9UPT8 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC20.99■□□□□ 0.95
ZC3H4Q9UPT8 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC20.99■□□□□ 0.95
ZC3H4Q9UPT8 SPCS2P4-201ENST00000436160 681 ntBASIC20.99■□□□□ 0.95
ZC3H4Q9UPT8 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC20.99■□□□□ 0.95
ZC3H4Q9UPT8 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZC3H4Q9UPT8 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC20.99■□□□□ 0.95
ZC3H4Q9UPT8 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC20.99■□□□□ 0.95
ZC3H4Q9UPT8 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC20.99■□□□□ 0.95
ZC3H4Q9UPT8 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZC3H4Q9UPT8 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC20.99■□□□□ 0.95
ZC3H4Q9UPT8 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC20.99■□□□□ 0.95
ZC3H4Q9UPT8 MIR6799-201ENST00000620297 69 ntBASIC20.99■□□□□ 0.95
ZC3H4Q9UPT8 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZC3H4Q9UPT8 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZC3H4Q9UPT8 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ZC3H4Q9UPT8 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZC3H4Q9UPT8 PC-208ENST00000529047 1607 ntTSL 3 BASIC20.98■□□□□ 0.95
ZC3H4Q9UPT8 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ZC3H4Q9UPT8 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZC3H4Q9UPT8 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ZC3H4Q9UPT8 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZC3H4Q9UPT8 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZC3H4Q9UPT8 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZC3H4Q9UPT8 CYP51A1P2-201ENST00000419457 1499 ntBASIC20.98■□□□□ 0.95
ZC3H4Q9UPT8 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZC3H4Q9UPT8 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC20.98■□□□□ 0.95
ZC3H4Q9UPT8 U91328.1-201ENST00000437528 223 ntBASIC20.98■□□□□ 0.95
ZC3H4Q9UPT8 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC20.98■□□□□ 0.95
ZC3H4Q9UPT8 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC20.98■□□□□ 0.95
ZC3H4Q9UPT8 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC20.98■□□□□ 0.95
ZC3H4Q9UPT8 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC20.98■□□□□ 0.95
ZC3H4Q9UPT8 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
ZC3H4Q9UPT8 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZC3H4Q9UPT8 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.98■□□□□ 0.95
ZC3H4Q9UPT8 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZC3H4Q9UPT8 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ZC3H4Q9UPT8 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.98■□□□□ 0.95
ZC3H4Q9UPT8 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
ZC3H4Q9UPT8 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZC3H4Q9UPT8 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
ZC3H4Q9UPT8 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZC3H4Q9UPT8 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.97■□□□□ 0.95
ZC3H4Q9UPT8 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.97■□□□□ 0.95
ZC3H4Q9UPT8 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZC3H4Q9UPT8 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZC3H4Q9UPT8 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC20.97■□□□□ 0.95
ZC3H4Q9UPT8 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms