Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPA1Q9UND3 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
NPIPA1Q9UND3 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPA1Q9UND3 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPA1Q9UND3 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.14■□□□□ 0.17
NPIPA1Q9UND3 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.14■□□□□ 0.17
NPIPA1Q9UND3 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.14■□□□□ 0.17
NPIPA1Q9UND3 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.14■□□□□ 0.17
NPIPA1Q9UND3 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.14■□□□□ 0.17
NPIPA1Q9UND3 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
NPIPA1Q9UND3 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.14■□□□□ 0.17
NPIPA1Q9UND3 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPA1Q9UND3 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.14■□□□□ 0.17
NPIPA1Q9UND3 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.14■□□□□ 0.17
NPIPA1Q9UND3 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.14■□□□□ 0.17
NPIPA1Q9UND3 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.14■□□□□ 0.17
NPIPA1Q9UND3 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.14■□□□□ 0.17
NPIPA1Q9UND3 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.14■□□□□ 0.17
NPIPA1Q9UND3 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPA1Q9UND3 AC067852.2-201ENST00000590513 2313 ntBASIC16.14■□□□□ 0.17
NPIPA1Q9UND3 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
NPIPA1Q9UND3 AC132938.6-201ENST00000623828 1655 ntBASIC16.14■□□□□ 0.17
NPIPA1Q9UND3 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPA1Q9UND3 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPA1Q9UND3 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NPIPA1Q9UND3 KRT18P55-202ENST00000578578 1546 ntBASIC16.14■□□□□ 0.17
NPIPA1Q9UND3 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
NPIPA1Q9UND3 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
NPIPA1Q9UND3 ZNF259P1-201ENST00000407656 1365 ntBASIC16.13■□□□□ 0.17
NPIPA1Q9UND3 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.13■□□□□ 0.17
NPIPA1Q9UND3 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA1Q9UND3 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA1Q9UND3 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.13■□□□□ 0.17
NPIPA1Q9UND3 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.13■□□□□ 0.17
NPIPA1Q9UND3 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA1Q9UND3 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
NPIPA1Q9UND3 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
NPIPA1Q9UND3 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA1Q9UND3 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
NPIPA1Q9UND3 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
NPIPA1Q9UND3 FAM220CP-201ENST00000395253 831 ntBASIC16.13■□□□□ 0.17
NPIPA1Q9UND3 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.13■□□□□ 0.17
NPIPA1Q9UND3 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA1Q9UND3 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.13■□□□□ 0.17
NPIPA1Q9UND3 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA1Q9UND3 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA1Q9UND3 DUTP2-201ENST00000519164 463 ntBASIC16.13■□□□□ 0.17
NPIPA1Q9UND3 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.13■□□□□ 0.17
NPIPA1Q9UND3 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.13■□□□□ 0.17
NPIPA1Q9UND3 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.13■□□□□ 0.17
NPIPA1Q9UND3 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA1Q9UND3 TERC-201ENST00000602385 541 ntBASIC16.13■□□□□ 0.17
NPIPA1Q9UND3 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA1Q9UND3 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
NPIPA1Q9UND3 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.13■□□□□ 0.17
NPIPA1Q9UND3 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA1Q9UND3 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.13■□□□□ 0.17
NPIPA1Q9UND3 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA1Q9UND3 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA1Q9UND3 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA1Q9UND3 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
NPIPA1Q9UND3 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA1Q9UND3 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA1Q9UND3 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA1Q9UND3 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA1Q9UND3 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA1Q9UND3 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA1Q9UND3 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA1Q9UND3 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA1Q9UND3 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.13■□□□□ 0.17
NPIPA1Q9UND3 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NPIPA1Q9UND3 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA1Q9UND3 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA1Q9UND3 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA1Q9UND3 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA1Q9UND3 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA1Q9UND3 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA1Q9UND3 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.12■□□□□ 0.17
NPIPA1Q9UND3 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.12■□□□□ 0.17
NPIPA1Q9UND3 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA1Q9UND3 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
NPIPA1Q9UND3 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.12■□□□□ 0.17
NPIPA1Q9UND3 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA1Q9UND3 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA1Q9UND3 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA1Q9UND3 PCDHB18P-201ENST00000524813 2368 ntBASIC16.12■□□□□ 0.17
NPIPA1Q9UND3 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA1Q9UND3 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.12■□□□□ 0.17
NPIPA1Q9UND3 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA1Q9UND3 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA1Q9UND3 KRT18P13-201ENST00000400056 1290 ntBASIC16.12■□□□□ 0.17
NPIPA1Q9UND3 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.12■□□□□ 0.17
NPIPA1Q9UND3 OR7E14P-202ENST00000530490 1290 ntBASIC16.12■□□□□ 0.17
NPIPA1Q9UND3 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA1Q9UND3 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.12■□□□□ 0.17
NPIPA1Q9UND3 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.12■□□□□ 0.17
NPIPA1Q9UND3 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.12■□□□□ 0.17
NPIPA1Q9UND3 PNMT-203ENST00000581428 677 ntTSL 2 BASIC16.12■□□□□ 0.17
NPIPA1Q9UND3 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.12■□□□□ 0.17
NPIPA1Q9UND3 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms