Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
LRFN1Q9P244 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.03■□□□□ 0.16
LRFN1Q9P244 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRFN1Q9P244 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
LRFN1Q9P244 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
LRFN1Q9P244 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRFN1Q9P244 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRFN1Q9P244 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
LRFN1Q9P244 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.03■□□□□ 0.16
LRFN1Q9P244 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRFN1Q9P244 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRFN1Q9P244 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.03■□□□□ 0.16
LRFN1Q9P244 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRFN1Q9P244 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.03■□□□□ 0.16
LRFN1Q9P244 MED15P5-201ENST00000423150 992 ntBASIC16.03■□□□□ 0.16
LRFN1Q9P244 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.03■□□□□ 0.16
LRFN1Q9P244 AL591424.1-201ENST00000442569 1213 ntBASIC16.03■□□□□ 0.16
LRFN1Q9P244 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.03■□□□□ 0.16
LRFN1Q9P244 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.03■□□□□ 0.16
LRFN1Q9P244 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRFN1Q9P244 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.03■□□□□ 0.16
LRFN1Q9P244 FAM197Y3-203ENST00000618346 717 ntBASIC16.03■□□□□ 0.16
LRFN1Q9P244 AC004706.3-202ENST00000621574 984 ntBASIC16.03■□□□□ 0.16
LRFN1Q9P244 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRFN1Q9P244 BICD1-207ENST00000551848 1962 ntBASIC16.03■□□□□ 0.16
LRFN1Q9P244 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRFN1Q9P244 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRFN1Q9P244 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
LRFN1Q9P244 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.03■□□□□ 0.16
LRFN1Q9P244 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRFN1Q9P244 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRFN1Q9P244 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRFN1Q9P244 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRFN1Q9P244 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LRFN1Q9P244 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.03■□□□□ 0.16
LRFN1Q9P244 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LRFN1Q9P244 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.02■□□□□ 0.16
LRFN1Q9P244 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.02■□□□□ 0.16
LRFN1Q9P244 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
LRFN1Q9P244 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRFN1Q9P244 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRFN1Q9P244 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRFN1Q9P244 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.02■□□□□ 0.16
LRFN1Q9P244 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
LRFN1Q9P244 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRFN1Q9P244 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
LRFN1Q9P244 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
LRFN1Q9P244 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LRFN1Q9P244 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.16
LRFN1Q9P244 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRFN1Q9P244 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRFN1Q9P244 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.02■□□□□ 0.16
LRFN1Q9P244 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRFN1Q9P244 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.02■□□□□ 0.16
LRFN1Q9P244 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.02■□□□□ 0.16
LRFN1Q9P244 AC009336.1-201ENST00000608941 1553 ntBASIC16.02■□□□□ 0.16
LRFN1Q9P244 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.02■□□□□ 0.16
LRFN1Q9P244 AC073621.1-201ENST00000392730 636 ntBASIC16.02■□□□□ 0.16
LRFN1Q9P244 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.02■□□□□ 0.16
LRFN1Q9P244 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.02■□□□□ 0.16
LRFN1Q9P244 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRFN1Q9P244 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.02■□□□□ 0.16
LRFN1Q9P244 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
LRFN1Q9P244 AC140113.2-201ENST00000604370 208 ntBASIC16.02■□□□□ 0.16
LRFN1Q9P244 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
LRFN1Q9P244 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LRFN1Q9P244 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRFN1Q9P244 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRFN1Q9P244 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
LRFN1Q9P244 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
LRFN1Q9P244 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.02■□□□□ 0.15
LRFN1Q9P244 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
LRFN1Q9P244 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRFN1Q9P244 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
LRFN1Q9P244 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRFN1Q9P244 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRFN1Q9P244 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRFN1Q9P244 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LRFN1Q9P244 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRFN1Q9P244 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.01■□□□□ 0.15
LRFN1Q9P244 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRFN1Q9P244 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.01■□□□□ 0.15
LRFN1Q9P244 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRFN1Q9P244 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRFN1Q9P244 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRFN1Q9P244 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
LRFN1Q9P244 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRFN1Q9P244 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRFN1Q9P244 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
LRFN1Q9P244 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.01■□□□□ 0.15
LRFN1Q9P244 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
LRFN1Q9P244 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LRFN1Q9P244 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
LRFN1Q9P244 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LRFN1Q9P244 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.01■□□□□ 0.15
LRFN1Q9P244 KRT18P13-201ENST00000400056 1290 ntBASIC16.01■□□□□ 0.15
LRFN1Q9P244 AC092865.5-201ENST00000545435 363 ntBASIC16.01■□□□□ 0.15
LRFN1Q9P244 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.01■□□□□ 0.15
LRFN1Q9P244 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.01■□□□□ 0.15
LRFN1Q9P244 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms