Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.59■□□□□ 0.57
CXXC1Q9P0U4 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC18.59■□□□□ 0.57
CXXC1Q9P0U4 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CXXC1Q9P0U4 AL158211.3-201ENST00000607385 239 ntBASIC18.59■□□□□ 0.57
CXXC1Q9P0U4 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CXXC1Q9P0U4 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CXXC1Q9P0U4 UXT-AS1-201ENST00000590504 1525 ntBASIC18.59■□□□□ 0.57
CXXC1Q9P0U4 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CXXC1Q9P0U4 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CXXC1Q9P0U4 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CXXC1Q9P0U4 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
CXXC1Q9P0U4 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.58■□□□□ 0.57
CXXC1Q9P0U4 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.57
CXXC1Q9P0U4 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CXXC1Q9P0U4 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CXXC1Q9P0U4 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.58■□□□□ 0.56
CXXC1Q9P0U4 SERBP1P5-201ENST00000510079 1181 ntBASIC18.58■□□□□ 0.56
CXXC1Q9P0U4 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CXXC1Q9P0U4 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC18.58■□□□□ 0.56
CXXC1Q9P0U4 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.58■□□□□ 0.56
CXXC1Q9P0U4 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.58■□□□□ 0.56
CXXC1Q9P0U4 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
CXXC1Q9P0U4 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.58■□□□□ 0.56
CXXC1Q9P0U4 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.58■□□□□ 0.56
CXXC1Q9P0U4 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CXXC1Q9P0U4 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CXXC1Q9P0U4 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.58■□□□□ 0.56
CXXC1Q9P0U4 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
CXXC1Q9P0U4 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CXXC1Q9P0U4 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.58■□□□□ 0.56
CXXC1Q9P0U4 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CXXC1Q9P0U4 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CXXC1Q9P0U4 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CXXC1Q9P0U4 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CXXC1Q9P0U4 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CXXC1Q9P0U4 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CXXC1Q9P0U4 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.57■□□□□ 0.56
CXXC1Q9P0U4 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CXXC1Q9P0U4 GNAS-203ENST00000306120 1878 ntBASIC18.57■□□□□ 0.56
CXXC1Q9P0U4 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CXXC1Q9P0U4 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CXXC1Q9P0U4 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.57■□□□□ 0.56
CXXC1Q9P0U4 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC18.57■□□□□ 0.56
CXXC1Q9P0U4 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.57■□□□□ 0.56
CXXC1Q9P0U4 IGHV3-62-201ENST00000520057 340 ntBASIC18.57■□□□□ 0.56
CXXC1Q9P0U4 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CXXC1Q9P0U4 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.57■□□□□ 0.56
CXXC1Q9P0U4 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.57■□□□□ 0.56
CXXC1Q9P0U4 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CXXC1Q9P0U4 AC025048.6-201ENST00000634326 1161 ntBASIC18.57■□□□□ 0.56
CXXC1Q9P0U4 AL358472.5-202ENST00000641448 1267 ntBASIC18.57■□□□□ 0.56
CXXC1Q9P0U4 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
CXXC1Q9P0U4 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
CXXC1Q9P0U4 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CXXC1Q9P0U4 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
CXXC1Q9P0U4 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.57■□□□□ 0.56
CXXC1Q9P0U4 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CXXC1Q9P0U4 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CXXC1Q9P0U4 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CXXC1Q9P0U4 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC18.57■□□□□ 0.56
CXXC1Q9P0U4 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.57■□□□□ 0.56
CXXC1Q9P0U4 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.57■□□□□ 0.56
CXXC1Q9P0U4 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CXXC1Q9P0U4 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.56■□□□□ 0.56
CXXC1Q9P0U4 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.56■□□□□ 0.56
CXXC1Q9P0U4 TDG-209ENST00000544861 1387 ntTSL 2 BASIC18.56■□□□□ 0.56
CXXC1Q9P0U4 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CXXC1Q9P0U4 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CXXC1Q9P0U4 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.56■□□□□ 0.56
CXXC1Q9P0U4 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.56■□□□□ 0.56
CXXC1Q9P0U4 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CXXC1Q9P0U4 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.56■□□□□ 0.56
CXXC1Q9P0U4 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CXXC1Q9P0U4 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CXXC1Q9P0U4 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CXXC1Q9P0U4 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
CXXC1Q9P0U4 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.56■□□□□ 0.56
CXXC1Q9P0U4 AC092580.3-201ENST00000430932 139 ntBASIC18.56■□□□□ 0.56
CXXC1Q9P0U4 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.56■□□□□ 0.56
CXXC1Q9P0U4 AC069120.2-201ENST00000524091 540 ntBASIC18.56■□□□□ 0.56
CXXC1Q9P0U4 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CXXC1Q9P0U4 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CXXC1Q9P0U4 AL596325.1-201ENST00000563991 1082 ntBASIC18.56■□□□□ 0.56
CXXC1Q9P0U4 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC18.56■□□□□ 0.56
CXXC1Q9P0U4 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.56■□□□□ 0.56
CXXC1Q9P0U4 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CXXC1Q9P0U4 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CXXC1Q9P0U4 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CXXC1Q9P0U4 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CXXC1Q9P0U4 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CXXC1Q9P0U4 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CXXC1Q9P0U4 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CXXC1Q9P0U4 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CXXC1Q9P0U4 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CXXC1Q9P0U4 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.56■□□□□ 0.56
CXXC1Q9P0U4 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CXXC1Q9P0U4 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CXXC1Q9P0U4 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CXXC1Q9P0U4 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CXXC1Q9P0U4 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms